Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Spro_1213 |
Symbol | |
ID | 5603066 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Serratia proteamaculans 568 |
Kingdom | Bacteria |
Replicon accession | NC_009832 |
Strand | - |
Start bp | 1329494 |
End bp | 1330234 |
Gene Length | 741 bp |
Protein Length | 246 aa |
Translation table | 11 |
GC content | 55% |
IMG OID | 640936734 |
Product | polar amino acid ABC transporter, inner membrane subunit |
Protein accession | YP_001477445 |
Protein GI | 157369456 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0765] ABC-type amino acid transport system, permease component |
TIGRFAM ID | [TIGR01726] amine acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family |
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Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 0.970615 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 17 |
Fosmid unclonability p-value | 0.897978 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCAATAG ATTGGAACTG GGGTATCTTC CTGCAGCAGG CCCCGTTTGG GAATACCACT TACCTCGGCT GGATTTGGTC CGGCTTTCAG GTCACGGTAG CCCTCTCCGT CTGTGCATGG ATTATCGCTT TCTTTGTCGG TTCGCTATTC GGTATTTTGC GTACCGTACC CAACCGCTTT CTTTCCACCC TCGGTACCTG TTACGTCGAA CTGTTCCGTA ACGTGCCGCT GATCGTGCAA TTCTTTACCT GGTATCTGGT GATCCCGGAA CTGCTGCCGG CCAATATGGG CATGTGGTTC AAAACCGAAC TCGATCCTAA CGTGCAGTTC TTCGTTTCCT CGATGCTGTG CCTGGGGCTG TTTACCGCCG CCCGCGTATG CGAACAGGTA CGCGCTGCCA TTCAGTCACT GCCACGCGGT CAGAGAGCCG CCGGACTGGC CATGGGCCTG ACGCTGCCGC AAACCTATCG CTACGTGCTG TTGCCGAACG CCTATCGGGT GATTGTGCCG CCGATGACCT CGGAAATGCT TAACCTGGTT AAAAACTCCG CCATTGCTTC CACCATCGGG CTGGTCGACA TGGCTGCGCA GGCCGGCAAA CTGCTGGATT ACTCCGCGCA TGCCTATGAA TCCTTTACCG CGATTACGCT GGCCTACATC GCCATCAACG CCGTGATCAT GCTGTTTATG CGACTGGTAG AGCGAAAAGT GCAGTTGCCC GGCAATCTGG GGAGTAAATA A
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Protein sequence | MSIDWNWGIF LQQAPFGNTT YLGWIWSGFQ VTVALSVCAW IIAFFVGSLF GILRTVPNRF LSTLGTCYVE LFRNVPLIVQ FFTWYLVIPE LLPANMGMWF KTELDPNVQF FVSSMLCLGL FTAARVCEQV RAAIQSLPRG QRAAGLAMGL TLPQTYRYVL LPNAYRVIVP PMTSEMLNLV KNSAIASTIG LVDMAAQAGK LLDYSAHAYE SFTAITLAYI AINAVIMLFM RLVERKVQLP GNLGSK
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