Gene Spro_1128 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSpro_1128 
Symbol 
ID5607369 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSerratia proteamaculans 568 
KingdomBacteria 
Replicon accessionNC_009832 
Strand
Start bp1242195 
End bp1242878 
Gene Length684 bp 
Protein Length227 aa 
Translation table11 
GC content50% 
IMG OID640936648 
ProductDNA-binding transcriptional repressor AcrR 
Protein accessionYP_001477360 
Protein GI157369371 
COG category[K] Transcription 
COG ID[COG1309] Transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0000000181094 
Fosmid HitchhikerNo 
Fosmid clonabilityunclonable 
 

Sequence

Gene sequence
ATGGCACGAA AAACCAAACA GCAGGCGCTA GAAACTCGAC AGCACATACT TGATGCTGCG 
GTGCAAGAAT TTTCTGAACG TGGCGTTTCT GCAACGTCAC TGACAGATAT TGCCACTGCT
GCCGGAGTTA CGCGTGGTGC AATTTATTGG CACTTCAAGA ACAAGGTAGA CCTGTTTAAT
GAAGTTTGGG AATTATCAGA GTCAAAAATT GGTGATCTGG AACTAGAGTA TCAGGCAAAG
TTCCCCGAGA ATCCACTGCG TATTTTACGG GAAATTCTGA TTTACATTCT GACGGCTACG
GTCGATGACA GCCGCCGACG AGCGCTGATG GAAATCGTTT TCCACAAGTG CGAATTCGTC
GGTGAGATGA TGCCGCTGCA TGAGGCGCGT AAAGTCTTAT ACCTGACAGG TTATGAACGC
ATTGAGTCGG TGCTGCGTGA CTGTATGGCC CATGGCCAAC TGCCCGTTGA TTTGCACACC
CGCCGCGCGG CAATTATCCT GCATGCTTAT ATTACCGGCC TGATGGAGAA TTGGCTGTTT
ATGCCGGAGA GCTTTGATCT GAAAGCCGAA GCGACGGCGC TGATCGACTC CTTCCTCGAA
ATGGTTCAAT TCAGTCCCGC CTTACGAATC AAGCCGGAAG AACTGGCGAC GCAGCCACAC
AGCGTCGAAA TCCATCCTTT ATAG
 
Protein sequence
MARKTKQQAL ETRQHILDAA VQEFSERGVS ATSLTDIATA AGVTRGAIYW HFKNKVDLFN 
EVWELSESKI GDLELEYQAK FPENPLRILR EILIYILTAT VDDSRRRALM EIVFHKCEFV
GEMMPLHEAR KVLYLTGYER IESVLRDCMA HGQLPVDLHT RRAAIILHAY ITGLMENWLF
MPESFDLKAE ATALIDSFLE MVQFSPALRI KPEELATQPH SVEIHPL