Gene Spro_1088 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSpro_1088 
Symbol 
ID5607059 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSerratia proteamaculans 568 
KingdomBacteria 
Replicon accessionNC_009832 
Strand
Start bp1195686 
End bp1196303 
Gene Length618 bp 
Protein Length205 aa 
Translation table11 
GC content52% 
IMG OID640936607 
Productcytochrome o ubiquinol oxidase subunit III 
Protein accessionYP_001477320 
Protein GI157369331 
COG category[C] Energy production and conversion 
COG ID[COG1845] Heme/copper-type cytochrome/quinol oxidase, subunit 3 
TIGRFAM ID[TIGR02842] cytochrome o ubiquinol oxidase, subunit III 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.000000882712 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.00000399844 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGTCAACTG ATACTCTGAC TAACCATGAC GCAGCCCATG CAGAGCATGG GCACCACGAC 
GCAGGTGAGA CCAAAGTCTT CGGATTCTGG ATCTACCTGA TGAGCGACTG TATTTTGTTT
GCGAGCTTGT TCGCGACTTA TGCAGTACTG GTGAACGGGA CCGCTGGCGG TCCCTCTGGC
AAAGACATCT TCGATCTGAA GTTTGTTCTG GTTGAAACCT TCCTGCTGTT GTTCAGCTCC
ATCACCTACG GTATGGCGAT GATCGGCATG AACAAAGGCA AGGTTGGCAG CGTTAATACC
TGGCTGTTCC TGACCTTCCT GTTTGGTCTG GGCTTCGTAG CGATGGAAAT CTATGAATTC
CATCACCTGA TCGTTGAAGG CTATGGTCCG GATCGCAGCG CGTTCCTGTC CGGCTTCTTC
GCACTGGTTG CTACCCACGG TCTGCACGTG ACTACCGGTC TGGTTTGGAT CGTTATCATG
ATGATTCAGG TCAGCAAGCG CGGCCTGACT TCAACCAATA AAACCCGTCT GATGTGCCTG
AGCCTGTTCT GGCACTTCCT GGACGTGGTT TGGATCTGCG TATTCACCGT TGTTTACCTG
CTGGGGGTTA TGTCATGA
 
Protein sequence
MSTDTLTNHD AAHAEHGHHD AGETKVFGFW IYLMSDCILF ASLFATYAVL VNGTAGGPSG 
KDIFDLKFVL VETFLLLFSS ITYGMAMIGM NKGKVGSVNT WLFLTFLFGL GFVAMEIYEF
HHLIVEGYGP DRSAFLSGFF ALVATHGLHV TTGLVWIVIM MIQVSKRGLT STNKTRLMCL
SLFWHFLDVV WICVFTVVYL LGVMS