Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Spro_1074 |
Symbol | nusB |
ID | 5605253 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Serratia proteamaculans 568 |
Kingdom | Bacteria |
Replicon accession | NC_009832 |
Strand | + |
Start bp | 1182657 |
End bp | 1183073 |
Gene Length | 417 bp |
Protein Length | 138 aa |
Translation table | 11 |
GC content | 53% |
IMG OID | 640936593 |
Product | transcription antitermination protein NusB |
Protein accession | YP_001477306 |
Protein GI | 157369317 |
COG category | [K] Transcription |
COG ID | [COG0781] Transcription termination factor |
TIGRFAM ID | [TIGR01951] transcription antitermination factor NusB |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 0.547473 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 5 |
Fosmid unclonability p-value | 0.000302454 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | GTGAAACCTG CTGCTCGTCG CCGCGCTCGT GAGTGCGCTG TTCAAGCGCT TTACTCTTGG CAGTTGTCTA AAAATGACAT TGCCGATGTT GAACACCAGT TCCTGTCGGA GCAAGATGTC AAAGATGTAG ACATCGTCTA TTTTCGGGAG CTGCTGTCCG GCGTGGCGGT GAATGCAGGT CTGCTGGATA GCCTGATGGC ACCTGTCCTG TCGCGTCAGC TCGAAGAGCT GGGCCAGGTA GAAAGAGCCG TTCTGCGTAT TGCGCTGTAT GAGCTGAAAA TGCGTGAGGA TGTGCCTTAC AAGGTGGCGA TCAACGAGGC GATCGAGCTG GCGAAAACCT TCGGCGCTGA AGACAGCCAC AAGTTTGTGA ATGGCGTGCT GGATAAAGTG GCACCAAGCA TTCGCAAGAA AAAATAA
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Protein sequence | MKPAARRRAR ECAVQALYSW QLSKNDIADV EHQFLSEQDV KDVDIVYFRE LLSGVAVNAG LLDSLMAPVL SRQLEELGQV ERAVLRIALY ELKMREDVPY KVAINEAIEL AKTFGAEDSH KFVNGVLDKV APSIRKKK
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