Gene Spro_1074 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSpro_1074 
SymbolnusB 
ID5605253 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSerratia proteamaculans 568 
KingdomBacteria 
Replicon accessionNC_009832 
Strand
Start bp1182657 
End bp1183073 
Gene Length417 bp 
Protein Length138 aa 
Translation table11 
GC content53% 
IMG OID640936593 
Producttranscription antitermination protein NusB 
Protein accessionYP_001477306 
Protein GI157369317 
COG category[K] Transcription 
COG ID[COG0781] Transcription termination factor 
TIGRFAM ID[TIGR01951] transcription antitermination factor NusB 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value0.547473 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.000302454 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
GTGAAACCTG CTGCTCGTCG CCGCGCTCGT GAGTGCGCTG TTCAAGCGCT TTACTCTTGG 
CAGTTGTCTA AAAATGACAT TGCCGATGTT GAACACCAGT TCCTGTCGGA GCAAGATGTC
AAAGATGTAG ACATCGTCTA TTTTCGGGAG CTGCTGTCCG GCGTGGCGGT GAATGCAGGT
CTGCTGGATA GCCTGATGGC ACCTGTCCTG TCGCGTCAGC TCGAAGAGCT GGGCCAGGTA
GAAAGAGCCG TTCTGCGTAT TGCGCTGTAT GAGCTGAAAA TGCGTGAGGA TGTGCCTTAC
AAGGTGGCGA TCAACGAGGC GATCGAGCTG GCGAAAACCT TCGGCGCTGA AGACAGCCAC
AAGTTTGTGA ATGGCGTGCT GGATAAAGTG GCACCAAGCA TTCGCAAGAA AAAATAA
 
Protein sequence
MKPAARRRAR ECAVQALYSW QLSKNDIADV EHQFLSEQDV KDVDIVYFRE LLSGVAVNAG 
LLDSLMAPVL SRQLEELGQV ERAVLRIALY ELKMREDVPY KVAINEAIEL AKTFGAEDSH
KFVNGVLDKV APSIRKKK