Gene Spro_1041 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSpro_1041 
Symbol 
ID5606600 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSerratia proteamaculans 568 
KingdomBacteria 
Replicon accessionNC_009832 
Strand
Start bp1144656 
End bp1145345 
Gene Length690 bp 
Protein Length229 aa 
Translation table11 
GC content54% 
IMG OID640936560 
Producttwo component transcriptional regulator 
Protein accessionYP_001477273 
Protein GI157369284 
COG category[K] Transcription
[T] Signal transduction mechanisms 
COG ID[COG0745] Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain 
TIGRFAM ID[TIGR02154] phosphate regulon transcriptional regulatory protein PhoB 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value0.194422 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCAAGAC GCATACTGGT GGTGGAAGAC GAAGCGCCGA TCCGTGAGAT GGTGTGCTTT 
GTGTTGGAAC AGAATGGTTA CCAACCGTTG GAAGCTGAGG ATTATGACAG CGCAGTGACG
CGCCTGTCTG AGCCGTTCCC TGATTTAGTG TTGCTCGACT GGATGTTACC CGGAGGTTCC
GGCATTCAGT TTATTAAACA TATGAAGCGT GAAGCGATGA CCCGCGATAT TCCGGTGATG
ATGCTGACCG CACGCGGTGA AGAAGAAGAC CGTGTCCGTG GGCTGGAGGT CGGGGCGGAT
GATTACATCA CCAAACCCTT CTCGCCGAAG GAGCTGGTGG CGCGCATCAA GGCGGTAATG
CGCCGCATTT CACCGATGGC GGTGGAAGAA GTGATTGAAA TGCAAGGGCT GAGCCTGGAT
CCTTCTTCAC ACCGGGTGAT GGCCAACGAG CAGGCGCTGG ATATGGGGCC GACCGAGTTC
AAATTGCTGC ACTTCTTTAT GACTCATCCA GAGCGTGTTT ATAGCCGCGA ACAGTTGCTT
AATCACGTCT GGGGCACTAA CGTTTATGTG GAAGACCGCA CCGTTGACGT GCATATCCGT
CGGCTCCGTA AGGCGTTAGA GACCAGTGGT CATGACAAAA TGGTTCAAAC CGTTCGGGGC
ACCGGCTACC GATTCTCAAC GCGCTACTGA
 
Protein sequence
MARRILVVED EAPIREMVCF VLEQNGYQPL EAEDYDSAVT RLSEPFPDLV LLDWMLPGGS 
GIQFIKHMKR EAMTRDIPVM MLTARGEEED RVRGLEVGAD DYITKPFSPK ELVARIKAVM
RRISPMAVEE VIEMQGLSLD PSSHRVMANE QALDMGPTEF KLLHFFMTHP ERVYSREQLL
NHVWGTNVYV EDRTVDVHIR RLRKALETSG HDKMVQTVRG TGYRFSTRY