Gene Spro_0934 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSpro_0934 
Symbol 
ID5604969 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSerratia proteamaculans 568 
KingdomBacteria 
Replicon accessionNC_009832 
Strand
Start bp1033717 
End bp1034373 
Gene Length657 bp 
Protein Length218 aa 
Translation table11 
GC content57% 
IMG OID640936455 
Productpolar amino acid ABC transporter, inner membrane subunit 
Protein accessionYP_001477168 
Protein GI157369179 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0765] ABC-type amino acid transport system, permease component 
TIGRFAM ID[TIGR01726] amine acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.080844 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTGACTT TTACCGACTG GGACATTGTG CGCAACCTGC TGTTGGCGGC ACGCTGGACC 
TTACTGCTGT CGCTGACGGC ATTTTTGGGC GGCACCCTGG TGACGCTGCC GCTGTTATTG
CTGCGCCTGA GCAAGCGTAA GTGGGCGCTG CGGTTTGTTC GCGGTTATTC CGAGCTGTTT
CAGGGCACGC CGCTGCTGAT GCAGCTGTTC CTGGCCTTTT TTGGGCTGGC ACTGTTCGGC
ATTGATGTGA GTCCCTGGAC CGCGGCCGCG TTGGCGCTGA CGTTATTCAC CAGCGCTTTT
CTGGTGGATA TCTGGTCCGG CAGCATCGCC GCATTGCCGA AAGGCCAGTG GGAAGCGTCG
CACTGTCTGG GGCTGAGTTT TGGCCAGACG TTGGTGCGGG TCATTGTGCC GCAGGCTGTG
CGCATCGCCA TTGCACCTAC CGTCGGCTTT TCGGTTCAGG TGATCAAGGG GACCGCATTG
GCGTCGATCA TCGGTTTTGT CGAACTGACC AAGGCCGGCA CCATGCTGAA CAACGTCACT
TATCAACCCT TTAAAGTTTT TGGTCTGGTC GCGCTGGGCT ATTTCCTGAT GTGTTATCCG
CTGTCGCGCT ACAGTCATTA TCTGGAGAAG AAATTCCATG CCGCTCATCA CAATTAA
 
Protein sequence
MLTFTDWDIV RNLLLAARWT LLLSLTAFLG GTLVTLPLLL LRLSKRKWAL RFVRGYSELF 
QGTPLLMQLF LAFFGLALFG IDVSPWTAAA LALTLFTSAF LVDIWSGSIA ALPKGQWEAS
HCLGLSFGQT LVRVIVPQAV RIAIAPTVGF SVQVIKGTAL ASIIGFVELT KAGTMLNNVT
YQPFKVFGLV ALGYFLMCYP LSRYSHYLEK KFHAAHHN