Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Spro_0934 |
Symbol | |
ID | 5604969 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Serratia proteamaculans 568 |
Kingdom | Bacteria |
Replicon accession | NC_009832 |
Strand | + |
Start bp | 1033717 |
End bp | 1034373 |
Gene Length | 657 bp |
Protein Length | 218 aa |
Translation table | 11 |
GC content | 57% |
IMG OID | 640936455 |
Product | polar amino acid ABC transporter, inner membrane subunit |
Protein accession | YP_001477168 |
Protein GI | 157369179 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0765] ABC-type amino acid transport system, permease component |
TIGRFAM ID | [TIGR01726] amine acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.080844 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 20 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCTGACTT TTACCGACTG GGACATTGTG CGCAACCTGC TGTTGGCGGC ACGCTGGACC TTACTGCTGT CGCTGACGGC ATTTTTGGGC GGCACCCTGG TGACGCTGCC GCTGTTATTG CTGCGCCTGA GCAAGCGTAA GTGGGCGCTG CGGTTTGTTC GCGGTTATTC CGAGCTGTTT CAGGGCACGC CGCTGCTGAT GCAGCTGTTC CTGGCCTTTT TTGGGCTGGC ACTGTTCGGC ATTGATGTGA GTCCCTGGAC CGCGGCCGCG TTGGCGCTGA CGTTATTCAC CAGCGCTTTT CTGGTGGATA TCTGGTCCGG CAGCATCGCC GCATTGCCGA AAGGCCAGTG GGAAGCGTCG CACTGTCTGG GGCTGAGTTT TGGCCAGACG TTGGTGCGGG TCATTGTGCC GCAGGCTGTG CGCATCGCCA TTGCACCTAC CGTCGGCTTT TCGGTTCAGG TGATCAAGGG GACCGCATTG GCGTCGATCA TCGGTTTTGT CGAACTGACC AAGGCCGGCA CCATGCTGAA CAACGTCACT TATCAACCCT TTAAAGTTTT TGGTCTGGTC GCGCTGGGCT ATTTCCTGAT GTGTTATCCG CTGTCGCGCT ACAGTCATTA TCTGGAGAAG AAATTCCATG CCGCTCATCA CAATTAA
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Protein sequence | MLTFTDWDIV RNLLLAARWT LLLSLTAFLG GTLVTLPLLL LRLSKRKWAL RFVRGYSELF QGTPLLMQLF LAFFGLALFG IDVSPWTAAA LALTLFTSAF LVDIWSGSIA ALPKGQWEAS HCLGLSFGQT LVRVIVPQAV RIAIAPTVGF SVQVIKGTAL ASIIGFVELT KAGTMLNNVT YQPFKVFGLV ALGYFLMCYP LSRYSHYLEK KFHAAHHN
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