Gene Spro_0908 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSpro_0908 
SymbolmltD 
ID5603763 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSerratia proteamaculans 568 
KingdomBacteria 
Replicon accessionNC_009832 
Strand
Start bp1007395 
End bp1008822 
Gene Length1428 bp 
Protein Length475 aa 
Translation table11 
GC content52% 
IMG OID640936428 
Productmembrane-bound lytic murein transglycosylase D 
Protein accessionYP_001477142 
Protein GI157369153 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0741] Soluble lytic murein transglycosylase and related regulatory proteins (some contain LysM/invasin domains) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones25 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATTGCTC GTCTTTTAAG CAACTACATT GACACACACA TGAAGGCTAA AGCGATATTT 
CTCGCCTCAG TCTTGCTAGT GGGGTGCCAG TCGTCCAGGC AGGACGCACC GGCCCCAGAA
CAGCATGCAC AGAGTTTGTC TTCGGCAGGT CAAGAAGGTG AAGCAGGAGA GTACACAGCG
AATGGTCGAG CGAGCTCGGC GCGGTGGCTA GATAACAATA GTGGTGCCGC GCAACAGAAC
CTGTGGAACT TCATTAGCGA CGAGCTGAAG ATGGAGGTTC CGGAAAATTC CCGGATCCGT
GATCAAAAAA GAAAGTACCT AAAAAGTAAG AGCTATCTCC ACGATGTAAC ATTACGGGCA
GAGCCGTACA TGTACTGGAT AGTCGGGCAG ATTAAGAAAC GCAATATGCC GATGGAACTG
GTACTGCTAC CCATAGTGGA GAGCGCTTTT GACCCCCACG CCACGTCAAG TGCCAACGCC
GCAGGGCTAT GGCAAATCGT GCCGCAAACG GGTCGGAATT ATGGTTTGAA AAACAACCAG
TGGTATGACG GGCGACGCGA TGTCGTGGCC TCGACGACTG CTGCGCTTGA TATGATGCAG
TATTTGAACC GCATGTTTAA CGGTGACTGG TTACTGACCA TTGCCGCTTA TAACAGTGGT
GAAGGCCGTG TCATGCAGGC GGTTAAGGCG AATAAACGCC AGGGTAAGCC AACCAATTTC
TGGGCATTGT CGCTTCCGCG TGAAACGTCA ATTTATGTCC CGAAAATGCT GGCGCTGAGC
GACATCATTA AAAACAGCAA GAAGTACGGT ATCAATCTGC CTAAGACTGA TAACACCCGT
GCACTGGCGC GTATTGATGT TGGACAGCAA ATACAGTTAA CTCAGGCGGC TGAGATGGCT
GGGCTTTCAT TGACCAAGAT GAAGGCTTAT AACCCAGGCT ACAAAAAAGG CGTTACGGCA
CCCAACGGGC CCCATTATAT TATGGTTCCC AAAGGTCATG CCGATCAGCT GAAAGACTCG
TTGGCCGATG GCCAGATCGC AGTGACTCAG CCAACCACTC AGTTGGCGAA GAACAGCGGC
CTGTCTGGTG GCAGCTCGTA TAAAGTGCGC TCCGGCGACA CGGTATCGGG CATTGCCAAG
CGGTTGAATA TCAAGTCCAG CGATTTGCAG AGTTGGAACA ATTTGCGCGC CAAGAGCACG
CTAAAAGTTG GGCAAACCCT GCAAGTGGCC AGCAATACCG GCAGTAACAG CAGCATCACC
TATCAGGTTC GTAAAGGTGA TTCGCTCGCC AGTATTGCAC GTCGTCACGG CGTCGATATT
AACGACGTGA TGCGTTGGAA CTCAACGCTT GCCAAAGCCA ACAGCAACCT GCAGCCGGGT
CTGAAATTGA CCCTGTTTGT CAGCGATAAA ACGTCGCCGG ATACCTAA
 
Protein sequence
MIARLLSNYI DTHMKAKAIF LASVLLVGCQ SSRQDAPAPE QHAQSLSSAG QEGEAGEYTA 
NGRASSARWL DNNSGAAQQN LWNFISDELK MEVPENSRIR DQKRKYLKSK SYLHDVTLRA
EPYMYWIVGQ IKKRNMPMEL VLLPIVESAF DPHATSSANA AGLWQIVPQT GRNYGLKNNQ
WYDGRRDVVA STTAALDMMQ YLNRMFNGDW LLTIAAYNSG EGRVMQAVKA NKRQGKPTNF
WALSLPRETS IYVPKMLALS DIIKNSKKYG INLPKTDNTR ALARIDVGQQ IQLTQAAEMA
GLSLTKMKAY NPGYKKGVTA PNGPHYIMVP KGHADQLKDS LADGQIAVTQ PTTQLAKNSG
LSGGSSYKVR SGDTVSGIAK RLNIKSSDLQ SWNNLRAKST LKVGQTLQVA SNTGSNSSIT
YQVRKGDSLA SIARRHGVDI NDVMRWNSTL AKANSNLQPG LKLTLFVSDK TSPDT