| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Spro_0865 |
|---|
| Symbol | |
|---|
| ID | 5602769 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Serratia proteamaculans 568 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009832 |
|---|
| Strand | - |
|---|
| Start bp | 959216 |
|---|
| End bp | 960880 |
|---|
| Gene Length | 1665 bp |
|---|
| Protein Length | 554 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 51% |
|---|
| IMG OID | 640936380 |
|---|
| Product | tail fiber repeat 2-containing protein |
|---|
| Protein accession | YP_001477099 |
|---|
| Protein GI | 157369110 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG5301] Phage-related tail fibre protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 20 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 8 |
|---|
| Fosmid unclonability p-value | 0.0127303 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACAGCAA AATATCGCGC CCTGCTCACC GATCAGGGTA AAGCGCTGCT GGCTAACGCC
GCGGCAACCG GCCAGAAGCT GGAGATCACC CAGATGGCGG TCGGCGATGG CGGCGGCTCG
GCCACTCTGC CCAGCGAAAG CCAAACCAGG CTGGTGAATG AAAAACGACG GGCGGTGCTC
AATTCCCTGC AGGTTAACGC CGACAGCGGC AACCAGGTGA TCGCCGAGCA GGTGATCCCG
GAAGATACCG GTGGCTGGTG GATCCGTGAA TTGGGGTTGT ACGATAAAAA TGGTGTACTG
GTGGCCGTGG CTAATACACC AGACACTTAC AAGCCATTGC TGGCCGAAGG TGCCGGTCGT
ACTCAGGTAG TGCGCATGGT CCTGCTGGTC AAAGGTGACG CCAGCGCGGT GATTGTGGCG
GACAAAACCG CCGTGCTGGT TTCCCGCGAT ACGCTGGATG CGGCTATCGC CGAACATGCC
CGTTCACGTA ACCACCCGGA TGCCACCCTG CTGGCCAAAG GCTTCACCCA ACTGAGCAGC
GACAGCAATA GCAACAGCGA AGTTCTGGCA GCGACGCCAA AAGCGGTGAA AGCGGTTAAT
GATGCAAGCC TCAAAAAAAC CGATAACCTT TCGGACCTGA CCAACAAAGC CACCGCACGT
GGCAATCTCG CACTGGGTAA TGCGGCAACG AGAAATGTGG GGACTGAAGC TACAAATCTG
ATGGAGGTCG GCGCGTTCGG TTTCGGCGCA GGTATAAAGC ATCATGCCGA TGCCTATAGT
AACCTTGGTG AAATTTATCG GGTGAATAAC TTATCAAAAA ATGCTCCTGG ATCAGGCACC
TATGGTGTTC TCAATCTCCC TTGCGATGGA GGACCCTCCA GCGGTTATTT GGCAATACAA
AACAGCGCGG CTGCCTATAT CGGTATTTCC ACCGTTCCGG AGAAACCACT GTCGTGGTAC
CGAATTTATA CCACGGCCTA TAAACCCACG GCGGCAGATG TCGGGGCTTA CAGCAAGGCC
GAGACCGATG GCAAGTTTGT CAAACAGATC GGCGATACTA TAACCGGTGG CCTAACGGTT
AATGGTTCTA TTGAAACCAA GTCAGGGCTG ACCACTCCGT CATTATCGGT GAATGGTAAC
TCGGTTATTT CAGGTCAACT GACAGCTAAA GCCGGTGTCG AACTGTTTGG GACATCTCCT
TATATCGATT TTCATTACGG TAATACCAAT ACGGATTATG ATGTCCGCAT TATCAATGAA
AAACAAGGTC AACTCACCCT CGGAGCTAAA ACCGTTCGAG TTAATGAAAA CTTTTCGGTT
GGCGGTGATG CTTATATTGA TGGTAGATTG TATGCAACCA TAGAATGCCG CGCAGGCGAA
GCTTTATTTG CTGGTAACTC TGCCTATCAA TCAGACGGAA ATATAAACGG CAGTATCTGG
GGTGGTTATT TATCTAACTA CCTTAATCAA AATTTTGTAC GAGACATTCG CCTTGGCTCT
GTAGAGAGTG CGCCGTCTTG GAATGGACCA GGTTACAATG ATAATGCAGG CTACGTACTG
ACAGGGGCAT CAAATTATAA TATGGATGAG TACCTAGATC ACATTTACCG TCGCCCGCTG
CAAAAGCATA TTAATGGTAA CTGGGTTACC GTATGGAGCG TTTAA
|
|---|
| Protein sequence | MTAKYRALLT DQGKALLANA AATGQKLEIT QMAVGDGGGS ATLPSESQTR LVNEKRRAVL
NSLQVNADSG NQVIAEQVIP EDTGGWWIRE LGLYDKNGVL VAVANTPDTY KPLLAEGAGR
TQVVRMVLLV KGDASAVIVA DKTAVLVSRD TLDAAIAEHA RSRNHPDATL LAKGFTQLSS
DSNSNSEVLA ATPKAVKAVN DASLKKTDNL SDLTNKATAR GNLALGNAAT RNVGTEATNL
MEVGAFGFGA GIKHHADAYS NLGEIYRVNN LSKNAPGSGT YGVLNLPCDG GPSSGYLAIQ
NSAAAYIGIS TVPEKPLSWY RIYTTAYKPT AADVGAYSKA ETDGKFVKQI GDTITGGLTV
NGSIETKSGL TTPSLSVNGN SVISGQLTAK AGVELFGTSP YIDFHYGNTN TDYDVRIINE
KQGQLTLGAK TVRVNENFSV GGDAYIDGRL YATIECRAGE ALFAGNSAYQ SDGNINGSIW
GGYLSNYLNQ NFVRDIRLGS VESAPSWNGP GYNDNAGYVL TGASNYNMDE YLDHIYRRPL
QKHINGNWVT VWSV
|
|---|
| |