Gene Spro_0787 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSpro_0787 
Symbol 
ID5604129 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSerratia proteamaculans 568 
KingdomBacteria 
Replicon accessionNC_009832 
Strand
Start bp875664 
End bp876365 
Gene Length702 bp 
Protein Length233 aa 
Translation table11 
GC content59% 
IMG OID640936298 
Product5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase 
Protein accessionYP_001477021 
Protein GI157369032 
COG category[F] Nucleotide transport and metabolism 
COG ID[COG0775] Nucleoside phosphorylase 
TIGRFAM ID[TIGR01704] 5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase
[TIGR01705] 5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase, putative 


Plasmid Coverage information

Num covering plasmid clones33 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value0.275653 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAGTAG GCATCATCGG CGCAATGGAG CAGGAAGTCA CCCTGCTGCG CGATCAAATT 
GAAAACCGTC AGACCATTCA ACGCGCGGGC TGTGAAATCT ATACCGGCCA GATCGGCGGT
GTTGACGTGG CGCTGCTCAA ATCCGGCATC GGTAAGGTTT CTGCCGCCAT GGGTACCACC
CTGCTGCTGG AACACTGCAA GCCGGACCTG GTGATCAATA CCGGTTCCGC CGGTGGCCTG
GCCAGCACGC TGAAGGTCGG CGATATTGTG GTATCCGAAG AAGTGCGCTA CCACGATGCC
GACGTGACCG CCTTTGGATA CGAGCCAGGC CAGATGGCCG GCTGCCCGGC GGCGTTTGTG
GCAGACGACG CGCTGATTGC GCTGGCCGAA AGCTGCATCA AACAATTGAA CCTGAACGCT
GTACGCGGCC TGATTTGCAG CGGTGATGCT TTCATTAACG GTGCAGAGCC ACTGGCACGC
ATCCGCGCTA CCTTCCCGAA CGTAGCGGCA GTAGAAATGG AAGCCGCGGC AGTCGGGCAC
GTCTGCCATC TGTTCGGCAC GCCGTTTGTG GTAGTGCGCG CTATCTCTGA CGTGGCCGAC
AGTGAATCGC ACATGAGTTT TGAGGAGTTC CTTGTCGTGG CGGCCAAGCA ATCTACGCTG
ATGGTCAACG CCATGCTGCA GACTCTGGCT AAGCGCGGTT GA
 
Protein sequence
MKVGIIGAME QEVTLLRDQI ENRQTIQRAG CEIYTGQIGG VDVALLKSGI GKVSAAMGTT 
LLLEHCKPDL VINTGSAGGL ASTLKVGDIV VSEEVRYHDA DVTAFGYEPG QMAGCPAAFV
ADDALIALAE SCIKQLNLNA VRGLICSGDA FINGAEPLAR IRATFPNVAA VEMEAAAVGH
VCHLFGTPFV VVRAISDVAD SESHMSFEEF LVVAAKQSTL MVNAMLQTLA KRG