| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Spro_0714 |
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| Symbol | carB |
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| ID | 5605228 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Serratia proteamaculans 568 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009832 |
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| Strand | + |
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| Start bp | 789226 |
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| End bp | 792450 |
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| Gene Length | 3225 bp |
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| Protein Length | 1074 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 640936225 |
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| Product | carbamoyl phosphate synthase large subunit |
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| Protein accession | YP_001476948 |
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| Protein GI | 157368959 |
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| COG category | [E] Amino acid transport and metabolism
[F] Nucleotide transport and metabolism
[I] Lipid transport and metabolism |
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| COG ID | [COG0458] Carbamoylphosphate synthase large subunit (split gene in MJ)
[COG4770] Acetyl/propionyl-CoA carboxylase, alpha subunit |
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| TIGRFAM ID | [TIGR01369] carbamoyl-phosphate synthase, large subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 0.278068 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCAAAAC GTACAGACAT AAAAAGCATC CTGATCCTCG GCGCTGGCCC GATTGTTATC
GGCCAGGCGT GTGAGTTCGA CTACTCGGGT GCTCAGGCGT GTAAAGCGCT GCGCGAAGAG
GGTTACCGCG TTATTTTGGT GAACTCCAAC CCGGCCACTA TCATGACTGA CCCGGAAATG
GCCGATGCGA CCTACATCGA GCCGATTCAC TGGAAAGTAG TACGCAAAAT CATCGAAAAA
GAGCGCCCGG ATGCCGTGCT GCCGACCATG GGCGGCCAGA CCGCACTGAA CTGTGCGCTG
GAGCTGGAAC GTCAGGGCGT GCTGGCCGAA TTTGGCGTGA CCATGATTGG CGCCACCGCT
GACGCGATCG ATAAAGCCGA AGACCGTCGC CGTTTCGATG TGGCGATGAA AAAAATCGGC
CTGGACACCG CGCGCTCCGG TATCGCGCAC AATATGGAAG AAGCGCTGGC GGTTGCCGCT
GACGTTGGCT TCCCGTGCAT CATCCGTCCT TCCTTTACCA TGGGCGGCAG CGGCGGCGGC
ATCGCCTATA ACCGCGAAGA GTTCGAAGAG ATCTGCGAAC GCGGCCTGGA CTTGTCACCG
ACCAAAGAGC TGCTGATTGA CGAGTCGCTG ATTGGCTGGA AAGAGTACGA GATGGAGGTG
GTGCGCGATA AAAATGATAA CTGCATCATC GTCTGCTCGA TTGAAAACTT CGACGCCATG
GGCATCCATA CCGGTGACTC TATCACCGTG GCCCCGGCGC AGACGCTGAC CGACAAAGAA
TACCAAATCA TGCGTAACGC CTCGATGGCG GTGCTGCGTG AAATCGGCGT GGAAACCGGC
GGCTCCAACG TGCAGTTCTC GGTTAACCCG AAAACCGGCC GCCTGATCGT TATTGAAATG
AACCCGCGCG TGTCCCGCTC TTCGGCGCTG GCATCGAAAG CCACCGGCTT CCCGATTGCC
AAAATCGCCG CCAAGCTGGC GGTGGGTTAC ACCCTCGACG AACTGATGAA CGATATCACC
GGTGGCCGTA CGCCGGCCTC GTTTGAACCG TCCATCGACT ACGTGGTAAC CAAAATTCCT
CGTTTCAACT TCGAGAAATT TGCCGGTGCC AACGACCGTC TGACCACCCA AATGAAATCC
GTCGGCGAAG TGATGGCGAT TGGCCGCACC CAGCAAGAGT CGCTGCAAAA AGCGCTGCGC
GGCCTGGAAG TGGGCGCCAC CGGTTTTGAC CCTAAAGTAA GCCTGGACGA CCCGGAAGCG
CTGACCAAAA TTCGCCGTGA ACTGAAAGAT GCCGGCTCTG ACCGCATTTG GTACATCGCA
GATGCCTTCC GCGCCGGCCT GTCGGTGGAC GGCGTATTCA ACCTGACCAA CGTCGACCGC
TGGTTCCTGG TGCAGATTGA AGAGCTGGTA CGCCTGGAAG AGCAGGTGGC CGAAACCGGC
ATCAACGGTT TAACGCAAGA GTTCCTGCGC ACCCTGAAGC GTAAAGGCTT CGCCGATGCG
CGTCTGGCTA CCCTGGCCGG CGTTGCCGAA AGCGAAATCC GCAAGCTGCG CCACGGTTAT
GGGCTGCACC CGGTTTACAA GCGTGTGGAT ACCTGCGCGG CAGAATTCGC CACCGACACC
GCTTACATGT ACTCCACCTA TGAAGAAGAG TGCGAGTCTA ATCCGACCAA CGACCGTCCG
AAAATCATGG TGTTGGGCGG TGGTCCGAAC CGTATCGGCC AGGGCATCGA GTTCGACTAC
TGCTGCGTAC ACGCCTCGCT GGCGCTGCGC GAAGACGGTT ACGAGACCAT TATGGTCAAC
TGTAACCCGG AAACCGTGTC TACCGACTAC GACACCTCCG ACCGTCTGTA CTTCGAGCCG
GTCACGCTGG AAGACGTGCT GGAAATCGTG CGTATCGAGA AGCCGAAAGG CGTGATCGTG
CAGTACGGTG GCCAGACCCC GCTGAAGCTG GCGCGTGAGC TGGAAGCCGC AGGCGTGCCG
ATTATCGGTA CCAGCCCGGA TGCGATTGAC CGTGCGGAAG ACCGCGAGCG TTTCCAACAG
GCGGTACAGC GTCTTGGCCT GAAACAGCCG GCCAACGCCA CCGTCGCCAC CATTGAACAG
GCGGTAGAGA AAGCGGCCGG TATCGGTTAC CCGTTGGTGG TTCGTCCTTC CTACGTACTG
GGCGGCCGCG CGATGGAAAT CGTCTACGAC GACATCGACC TGCGCCGTTA CTTCCAGAAC
GCGGTCAGCG TCTCTAACGA CGCGCCAGTG CTGCTGGACC GCTTCCTGGA TGACGCGGTA
GAAGTCGACG TCGATGCGAT TTGCGACGGC GAGCGGGTGC TGATTGGCGG CATCATGGAA
CACATCGAAC AGGCGGGCGT GCATTCCGGT GACTCCGCTT GCTCACTGCC GGCCTACACC
CTGAGCAAAG AGATCCAGGA CGTGATGCGT CAGCAGGTTG AGAAACTGGC GTTCGAGCTG
CAGGTTCGTG GTCTGATGAA CGTGCAGTTT GCGGTGAAGA ACAACGAAGT CTACCTGATT
GAAGTCAACC CACGTGCCGC GCGTACCGTG CCATTCGTCT CCAAGGCGAC CGGCGTCCAG
TTGGCCAAGG TGGCGGCACG CGTGATGGCA GGCAAAACGC TGGCCGAGCA GGGCGTAACG
GAAGAAGTTA TCCCACCTTA CTACTCGGTG AAAGAAGTGG TGTTGCCGTT CAACAAGTTC
CCGGGCGTCG ACCCGATTTT AGGGCCGGAA ATGCGCTCTA CCGGGGAAGT GATGGGCGTT
GGCCGCACCT TCGCGGAAGC CTTCTCCAAG GCGATGCTCG GCAGCCAGTC AGGCATGAAA
AAACAGGGCC GAGCACTGCT GTCGGTACGT GAAGGCGATA AAGCCCGGGT GGTGGATCTG
GCGGCAAGCC TGCTGAAACA GGGCTTTGAA CTGGATGCGA CCCACGGGAC CGCCGTGGTG
CTGGGCGAAG CGGGGATTAA CCCGCGCCTG GTCAACAAGG TGCATGAAGG CCGTCCGCAC
ATTCAGGACC GTATCAAGAA TGGCGAGTAC ACCTACATCG TAAACACCAC GGCCGGCCGT
CAGGCGATTG AGGACTCCAA GCTGATTCGC CGTAGTGCGC TGCAGTACAA GGTGCATTAC
GACACTACCC TGAACGGCGG CTTCGCCACC GCGATGGCGC TGAAGGCTGA CCCGACCGAA
CAGGTCACTT CGGTGCAGGA GATGCACGCA CGCATCGGTA AGTAA
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| Protein sequence | MPKRTDIKSI LILGAGPIVI GQACEFDYSG AQACKALREE GYRVILVNSN PATIMTDPEM
ADATYIEPIH WKVVRKIIEK ERPDAVLPTM GGQTALNCAL ELERQGVLAE FGVTMIGATA
DAIDKAEDRR RFDVAMKKIG LDTARSGIAH NMEEALAVAA DVGFPCIIRP SFTMGGSGGG
IAYNREEFEE ICERGLDLSP TKELLIDESL IGWKEYEMEV VRDKNDNCII VCSIENFDAM
GIHTGDSITV APAQTLTDKE YQIMRNASMA VLREIGVETG GSNVQFSVNP KTGRLIVIEM
NPRVSRSSAL ASKATGFPIA KIAAKLAVGY TLDELMNDIT GGRTPASFEP SIDYVVTKIP
RFNFEKFAGA NDRLTTQMKS VGEVMAIGRT QQESLQKALR GLEVGATGFD PKVSLDDPEA
LTKIRRELKD AGSDRIWYIA DAFRAGLSVD GVFNLTNVDR WFLVQIEELV RLEEQVAETG
INGLTQEFLR TLKRKGFADA RLATLAGVAE SEIRKLRHGY GLHPVYKRVD TCAAEFATDT
AYMYSTYEEE CESNPTNDRP KIMVLGGGPN RIGQGIEFDY CCVHASLALR EDGYETIMVN
CNPETVSTDY DTSDRLYFEP VTLEDVLEIV RIEKPKGVIV QYGGQTPLKL ARELEAAGVP
IIGTSPDAID RAEDRERFQQ AVQRLGLKQP ANATVATIEQ AVEKAAGIGY PLVVRPSYVL
GGRAMEIVYD DIDLRRYFQN AVSVSNDAPV LLDRFLDDAV EVDVDAICDG ERVLIGGIME
HIEQAGVHSG DSACSLPAYT LSKEIQDVMR QQVEKLAFEL QVRGLMNVQF AVKNNEVYLI
EVNPRAARTV PFVSKATGVQ LAKVAARVMA GKTLAEQGVT EEVIPPYYSV KEVVLPFNKF
PGVDPILGPE MRSTGEVMGV GRTFAEAFSK AMLGSQSGMK KQGRALLSVR EGDKARVVDL
AASLLKQGFE LDATHGTAVV LGEAGINPRL VNKVHEGRPH IQDRIKNGEY TYIVNTTAGR
QAIEDSKLIR RSALQYKVHY DTTLNGGFAT AMALKADPTE QVTSVQEMHA RIGK
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