Gene Spro_0601 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSpro_0601 
Symbol 
ID5606346 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSerratia proteamaculans 568 
KingdomBacteria 
Replicon accessionNC_009832 
Strand
Start bp665590 
End bp666336 
Gene Length747 bp 
Protein Length248 aa 
Translation table11 
GC content61% 
IMG OID640936109 
ProductTonB family protein 
Protein accessionYP_001476835 
Protein GI157368846 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0810] Periplasmic protein TonB, links inner and outer membranes 
TIGRFAM ID[TIGR01352] TonB family C-terminal domain 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones36 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTATCTGC TCTATCGTTC ACGTCACCTT TTCAGTTGGT TACCGGCGCT GATCGTCGTC 
GGCTGCGTAC TGTTTGCCAG CCAGCAGGCG GCGCTGAAAA TTCAGCCGCG CTATGACGAA
ACCGCCATGG AATTGGCGTT GGTCGAGCCT GAACCTGCAT CGGAACCTCA AGCGGAAACA
CCACCGGAGC CGCAACCCGA ACCCCCGCCG CCAGAGCCGG AAGCGATCCC CGAACCGGTT
GTGCCGGCGC CGGAGCCGAT TATCGAAGCC AAACCGGTGC CCAAACCACA GCCGAAACCC
AAGCCCAAGC CAGTAAAAGA AAAAGCCAGG CCGGTGGAGA AGGCTAAACC TGTTGCGGCC
CCAGCAGCGC CGAAGGCACT GGTCAGCAAA CCGGTGGCAC AACCTGCCCC GGTCGCCCCG
GCGGCGCCGA AAGTGAATAC GCAGGCAATC GAAAACGGTT ATCTGCAGGC GCTGCGTCGT
GAGCTGGAGC AGCGCAAGCG CTATCCAAGC GGGCGGCAGG CGTCACTTGA GCGGCCGCAG
GGCAACGTCG AGGTCTGGCT GGAGGTCGAT CGCAGCGGTC GGGTGCTCTC GTCCGGCATC
GCCAATAAAG CGGCCAGCAT GCTGCTCAAC CGTGCGGCGC TAAGCAGTCT GCAAAGCATC
AGCCAGGTGA AGCCGTTCCC AAGCGAGGCT TTCAACGGGC AAACAACAAA ACGATTTTCA
GCCACGTTCA ATTATCAGGC GCCTTGA
 
Protein sequence
MYLLYRSRHL FSWLPALIVV GCVLFASQQA ALKIQPRYDE TAMELALVEP EPASEPQAET 
PPEPQPEPPP PEPEAIPEPV VPAPEPIIEA KPVPKPQPKP KPKPVKEKAR PVEKAKPVAA
PAAPKALVSK PVAQPAPVAP AAPKVNTQAI ENGYLQALRR ELEQRKRYPS GRQASLERPQ
GNVEVWLEVD RSGRVLSSGI ANKAASMLLN RAALSSLQSI SQVKPFPSEA FNGQTTKRFS
ATFNYQAP