| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Spro_0501 |
|---|
| Symbol | |
|---|
| ID | 5607080 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Serratia proteamaculans 568 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009832 |
|---|
| Strand | + |
|---|
| Start bp | 554487 |
|---|
| End bp | 555626 |
|---|
| Gene Length | 1140 bp |
|---|
| Protein Length | 379 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 58% |
|---|
| IMG OID | 640936010 |
|---|
| Product | ABC-2 type transporter |
|---|
| Protein accession | YP_001476737 |
|---|
| Protein GI | 157368748 |
|---|
| COG category | [V] Defense mechanisms |
|---|
| COG ID | [COG0842] ABC-type multidrug transport system, permease component |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 39 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 22 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAAATCT ACTGGCAAAC CTTTGTCCGG GTGCTGCTTG GCATGCTGGA GAGGCCGATG
TGGTTGATGC TGATCCTGTC GCTGTGCGTC ATGAGCATGG TCTATGCCAA CCGGACGGTG
TGGGATCTGC CGGTCGGCGT GATTGATCAG GACCACAGCA CCGCCAGCCG CCAATTGATC
CGCCAACTGG ACGCGACCTC GAAGATTGCC ATCGTGACTT ACGATAGCCT CGAGCAGGCA
AAAAGTGACC TCGGCTGGCG TAAACTGTTC GCGGTGATCA TCATGCCGGT GGATCTGGAG
AAGAAGATCC TGAGCGGCCA AAATATCGTG GTACCGGTCT ATGGCGACGC CACCAACCGG
CTGGCCAACG GCCAGATCCA GCAGGACGTG GTTGCGGCCT ATCAGCAACT GCTGAACCAG
TACAACAACG GCTTACTGCT GCGCAGCGGT TTCAGCGAAC GCCAGGCGCA GGTGATCCTG
ACGCCCATAC GGGGGCAAAC GCTGGACGTG TTCAACCCTG GCATCAGCTT TGCGGCGATC
ATCTTCCCTG GCCTGCTGGT GATGCTGTTA CAGCACTCGT TATTGATTGC CTGCGTTCGC
GTCAGCATTG CCATGAAGAG CATCCCCGGC GGCAAGCCCC CGTTGGCGGC CCATTTGGGC
GGGCTGACGG CGCTGCTACC GATCTGGCTA TTCCTGTCTA TCGTGCTGTT TGTACTGTGG
CCGTGGGTCT TGGGCTATCG TCAGACGGCG AGTATTGCAG AAATTTTGTT GCTGACCTTC
CCGTTCCTGT TGGCGGTACT GGGGCTGGGC AAGCTGGTCA CCGAATGCCT GCGCAGCGTA
GAAATGATCT ACCTGACGCT GGCGTTTATC ACCACGCCGA TATTCTACCT CTCCGGTACC
ATCTGGCCGT TGCAGGCGAT GCCGGCCTGG GTGCGGGCGA TTTCCTACTG TATCCCCTCC
ACCTGGGCCA CCAAGGCCAT TGCCGGGGTT AACCAAATGG GCCTGTCGCT CAATGAAGTC
TGGGGTGACG TAGTGATGCT GCTGGTGTTG GGGATTATTT ACACCCTGCT GGGTGTCGGG
GTGGGTTTCA TGCGTAACAG CGTGGCGCTG CGTAGCCTGC TCCGCAAACG GGCAAGTTAA
|
|---|
| Protein sequence | MKIYWQTFVR VLLGMLERPM WLMLILSLCV MSMVYANRTV WDLPVGVIDQ DHSTASRQLI
RQLDATSKIA IVTYDSLEQA KSDLGWRKLF AVIIMPVDLE KKILSGQNIV VPVYGDATNR
LANGQIQQDV VAAYQQLLNQ YNNGLLLRSG FSERQAQVIL TPIRGQTLDV FNPGISFAAI
IFPGLLVMLL QHSLLIACVR VSIAMKSIPG GKPPLAAHLG GLTALLPIWL FLSIVLFVLW
PWVLGYRQTA SIAEILLLTF PFLLAVLGLG KLVTECLRSV EMIYLTLAFI TTPIFYLSGT
IWPLQAMPAW VRAISYCIPS TWATKAIAGV NQMGLSLNEV WGDVVMLLVL GIIYTLLGVG
VGFMRNSVAL RSLLRKRAS
|
|---|
| |