Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Spro_0491 |
Symbol | truB |
ID | 5606537 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Serratia proteamaculans 568 |
Kingdom | Bacteria |
Replicon accession | NC_009832 |
Strand | + |
Start bp | 542642 |
End bp | 543586 |
Gene Length | 945 bp |
Protein Length | 314 aa |
Translation table | 11 |
GC content | 59% |
IMG OID | 640936000 |
Product | tRNA pseudouridine synthase B |
Protein accession | YP_001476727 |
Protein GI | 157368738 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0130] Pseudouridine synthase |
TIGRFAM ID | [TIGR00431] tRNA pseudouridine 55 synthase |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 0.164014 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 8 |
Fosmid unclonability p-value | 0.0135399 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGAGTCGCC CTCGTCGCCG CGGCCGTGAT ATCCACGGTG TCCTGTTGCT GGACAAACCG CAGGGCCTGT CATCCAACGA CGCCCTGCAA AAAGTAAAGC GCCTCTATAA CGCCAATCGC GCGGGTCATA CCGGCGCGCT CGACCCGCTG GCGACCGGCA TGCTGCCAAT TTGCCTCGGT GAGGCGACCA AGTTTTCACA GTTCCTGCTC GACTCCGACA AACGCTATCG CGTGATTGCC CGACTGGGTC AGCGTACCGA TACCTCGGAT GCCGACGGCC AAATTGTGCA GGAGCGGCCG GTGAGTTTCA CCCAGGCGCA GCTCGATGCG GCGCTGGACA GCTTCCGTGG CGATATCAAG CAGGTGCCTT CGATGTATTC GGCGCTGAAA TACCAGGGCA AGAAACTCTA TGAGTATGCT CGCCAGGGTA TCGAAGTGCC GCGTGAAGCA CGCAGCATTA CCGTTTATGA ACTGCAGTTT ATTCGCTGGG AAGGGGATGA ACTGGAGCTG GAAATTCACT GCTCAAAAGG CACTTACATC CGCACCATCA CCGATGACCT CGGCGAGCTG CTGGGATGTG GCGCGCACGT GATCTACCTG CGTCGTCTGC AGGTGGCGAC CTACCCGACC GAGCGCATGG TCACGCTGGA GCAGTTGAAC GAATTGCTGG AGCAGGCTCA TCGGCAGGAA ATCGCCCCGG CCGAGCTGCT CGATCCGTTG TTGATGCCGA TGGACAGCCC GGTGGAGAAC TACCCGGAAG TGAATTTGCT GCCAGTGGTA GCGGGTTACG TTAAGCAAGG GCAACCGGTT CAGGTTGCCG GTGCACCGGC CTCGGGCATG GTTCGTATCA CCGAAGGTGA AGAGCGTAAA TTTATCGGCG TCGGTGATAT TGCCGATGAC GGTCGTGTGG CGCCGCGCCG CCTGGTAGTT GAATATTTCG ACTAA
|
Protein sequence | MSRPRRRGRD IHGVLLLDKP QGLSSNDALQ KVKRLYNANR AGHTGALDPL ATGMLPICLG EATKFSQFLL DSDKRYRVIA RLGQRTDTSD ADGQIVQERP VSFTQAQLDA ALDSFRGDIK QVPSMYSALK YQGKKLYEYA RQGIEVPREA RSITVYELQF IRWEGDELEL EIHCSKGTYI RTITDDLGEL LGCGAHVIYL RRLQVATYPT ERMVTLEQLN ELLEQAHRQE IAPAELLDPL LMPMDSPVEN YPEVNLLPVV AGYVKQGQPV QVAGAPASGM VRITEGEERK FIGVGDIADD GRVAPRRLVV EYFD
|
| |