Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Spro_0431 |
Symbol | hfq |
ID | 5602862 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Serratia proteamaculans 568 |
Kingdom | Bacteria |
Replicon accession | NC_009832 |
Strand | + |
Start bp | 483169 |
End bp | 483477 |
Gene Length | 309 bp |
Protein Length | 102 aa |
Translation table | 11 |
GC content | 50% |
IMG OID | 640935938 |
Product | RNA-binding protein Hfq |
Protein accession | YP_001476667 |
Protein GI | 157368678 |
COG category | [R] General function prediction only |
COG ID | [COG1923] Uncharacterized host factor I protein |
TIGRFAM ID | [TIGR02383] RNA chaperone Hfq |
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Plasmid Coverage information |
Num covering plasmid clones | 5 |
Plasmid unclonability p-value | 0.00000376356 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 0 |
Fosmid unclonability p-value | 0.0000000212811 |
Fosmid Hitchhiker | No |
Fosmid clonability | unclonable |
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Sequence |
Gene sequence | ATGGCTAAGG GGCAATCTTT GCAAGATCCG TTCCTGAACG CATTGCGTCG TGAACGTGTT CCGGTTTCTA TTTATTTGGT GAATGGTATT AAGCTGCAAG GCCAGATTGA GTCTTTTGAC CAGTTTGTCA TCCTGTTGAA AAACACGGTG AGCCAGATGG TTTATAAGCA CGCTATCTCT ACCGTTGTCC CGTCACGCCC GGTTTCGCAC CATAGCAATA CTCCGAGCGG CGGCACCAGT AACTATCACC ATGGTAACAA CCCGTCTGCG CCGCAACAGC CGCAGCAGGA AAGCGATGAC GCTGAATAA
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Protein sequence | MAKGQSLQDP FLNALRRERV PVSIYLVNGI KLQGQIESFD QFVILLKNTV SQMVYKHAIS TVVPSRPVSH HSNTPSGGTS NYHHGNNPSA PQQPQQESDD AE
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