| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Spro_0420 |
|---|
| Symbol | |
|---|
| ID | 5602500 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Serratia proteamaculans 568 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009832 |
|---|
| Strand | + |
|---|
| Start bp | 467167 |
|---|
| End bp | 468144 |
|---|
| Gene Length | 978 bp |
|---|
| Protein Length | 325 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 60% |
|---|
| IMG OID | 640935924 |
|---|
| Product | lysyl-tRNA synthetase |
|---|
| Protein accession | YP_001476656 |
|---|
| Protein GI | 157368667 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG2269] Truncated, possibly inactive, lysyl-tRNA synthetase (class II) |
|---|
| TIGRFAM ID | [TIGR00462] lysyl-tRNA synthetase-like protein GenX |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 26 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 2 |
|---|
| Fosmid unclonability p-value | 0.00000643447 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | ATGAGCGAAA CGGCAAGCTG GCAGCCAAGT GCACCCATCG CCAATTTGTT GAAGCGCGCA
GCGATCCTGA CTGAGATCCG GCGTTTCTTC GCCGATCGTG GCGTATTGGA AGTTGAGACG
CCAACCATGA GCCAGGCGAC GGTCACCGAT ATCCACCTGT TCCCGTTCCA GACGCGTTTC
GTCGGGCCCG GCGCGGCGGA TGGCCTGACG CTGTACATGA TGACCAGCCC GGAATACCAC
ATGAAGCGCT TGCTGGCGGC GGGCAGCGGT CCGATCTATC AGATGGGGCG CAGCTTCCGT
AATGAAGAAG CCGGCCGTCA CCACAACCCG GAATTCACCA TGCTGGAGTG GTACCGCCCG
CATTACGACA TGTACCGTCT GATGAATGAG GTGGACGATC TGCTGCAGCA GGTGCTGGAT
TGCGACAGCG CGGAAACCCT GTCCTATCAG CAGGCTTTCC TGCGCCATCT GGATATCGAT
CCGCTGTCAG CGGAGAAGGC ACAACTGCGT GAAGCGGCGG CCAAGCTGGA TCTGAGCAAC
ATTGCCGATA CGGAAGAAGA TCGCGATACG CTGTTGCAAC TGCTGTTTAC CGTCGGCGTG
GAGCCGCACA TTGGCCGTGA CAAACCGGCG TTCGTTTATC ACTTCCCGGC CAGCCAGGCG
TCGCTGGCGG AGATCAGTAC CGAGGATCAC CGGGTGGCGG AGCGTTTCGA GGTTTACTTC
AAAGGCATTG AGCTGGCGAA TGGCTTCCGT GAACTGACGG ACAGCCGCGA ACAAGGGCAG
CGTTTTGCCC AGGACAACCG CAAGCGTGCG GAACGTGGCC TGCCGCAGCA CCCGATTGAT
AACAACCTGC TGGATGCTTT GCAGCACGGC ATGCCTGAAT GCTCTGGCGT GGCGCTGGGG
GTTGACCGTT TGGTGATGCT GGCGCTGGGT GCCGAGAGCC TGAGTGAAGT GCTGGCGTTC
CCGGTCGATC GCGCATAA
|
|---|
| Protein sequence | MSETASWQPS APIANLLKRA AILTEIRRFF ADRGVLEVET PTMSQATVTD IHLFPFQTRF
VGPGAADGLT LYMMTSPEYH MKRLLAAGSG PIYQMGRSFR NEEAGRHHNP EFTMLEWYRP
HYDMYRLMNE VDDLLQQVLD CDSAETLSYQ QAFLRHLDID PLSAEKAQLR EAAAKLDLSN
IADTEEDRDT LLQLLFTVGV EPHIGRDKPA FVYHFPASQA SLAEISTEDH RVAERFEVYF
KGIELANGFR ELTDSREQGQ RFAQDNRKRA ERGLPQHPID NNLLDALQHG MPECSGVALG
VDRLVMLALG AESLSEVLAF PVDRA
|
|---|
| |