Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Spro_0295 |
Symbol | actP |
ID | 5607196 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Serratia proteamaculans 568 |
Kingdom | Bacteria |
Replicon accession | NC_009832 |
Strand | - |
Start bp | 347914 |
End bp | 349566 |
Gene Length | 1653 bp |
Protein Length | 550 aa |
Translation table | 11 |
GC content | 54% |
IMG OID | 640935799 |
Product | acetate permease |
Protein accession | YP_001476533 |
Protein GI | 157368544 |
COG category | [R] General function prediction only |
COG ID | [COG4147] Predicted symporter |
TIGRFAM ID | [TIGR00813] transporter, SSS family [TIGR02711] cation/acetate symporter ActP |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 0.510607 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 4 |
Fosmid unclonability p-value | 0.000229004 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGAAGCCTT TATTGTCTGT CGCCGCCCTA CTGATGCTGC CGGGCCTGGC TTTTGCTGAT GCCATTAGTG GCGAAGTTCA TCGCCAGCCG CTGAATATTC AGGCGATCGT GATGTTCGTA CTGTTTGTCG GTGCCACGCT ATACATCACT TACTGGGCTT CCAAACGAAC TCGTTCACGC CAGGATTACT ACACCGCAGG CGGCAAAATC ACCGGCCTGC AGAACGGCCT GGCGATTGCC GGCGACTTTA TGTCAGCCGC TTCTTTCCTG GGTATTTCCG CACTGGTGTA TACCTCTGGC TATGACGGAC TGATTTATTC CATCGGCTTC CTGATCGGCT GGCCGATCAT TTTGTTCCTG ATTGCAGAAC GCCTGCGAAA TCTGGGCCGT TATACCTTTG CTGACGTGGC CTCTTACCGA CTTAAGCAGA AACCAATCCG TACCCTTTCG GCCTGCGGCT CACTGGTGGT GGTCGCGCTA TACCTGATTG CACAGATGGT TGGCGCCGGT AAGCTGATCC AGTTACTGTT TGGTCTTAAC TACCACGTGG CGGTGATCCT GGTCGGTATT TTAATGGTGC TGTACGTGCT GTTCGGCGGC ATGCTGGCAA CCACCTGGGT ACAGATTATC AAAGCGGTAT TGTTGCTGGC CGGTGCCAGT TTTATGGCGC TGATGGTGAT GAAATCGGTC AATTTTGACT TCAATACCCT GTTTGCCGAG GCCGTGAAGG TGCATCCAAA AGGCATCGCC ATCATGAGCC CGGGCGGACT GGTGTCCGAT CCTATTTCCG CGCTCTCGTT GGGGCTGGCG CTGATGTTTG GTACTGCGGG TCTGCCGCAT ATTTTGATGC GCTTCTTTAC CGTCAGCGAT GCCAAAGAAG CCCGCAAGAG TGTGTTCTAT GCCACCGGCT TTATCGGTTA CTTCTATATC CTGACCTTTA TTATCGGCTT CGGCGCAATT TTGTTAGTCG GCCCTAATCC GGCATTCAAA GACGCTACCG GAGCGCTGTT GGGCGGTACC AATATGGCAG CGGTGCATTT GGCCAACGCC GTCGGCGGTA ACTTCTTCCT CGGGTTTATT TCGGCGGTCG CCTTTGCCAC CATTCTGGCG GTGGTTGCCG GCCTGACGCT GGCAGGAGCT TCTGCGGTAT CTCATGACTT GTACGCCAGC GTGATTAAAA ACGGTAAGGC GACCGAACGT GATGAACTGC GGGTTTCCAA AATTACCGTG GTGATCCTGG GGATCGTGGC CATTGCACTG GGGATTTTGT TCGAGAAACA GAATATCGCC TTTATGGTCG GGCTGGCCTT CTCGATTGCT GCCAGTTGTA ACTTCCCGAT TATCATTCTT TCAATGTATT GGTCACGCCT GACTACGCGC GGCGCCATGA TCGGCGGCTG GTTAGGTCTG CTGACGGCGG TGATCCTGAT GATCCTCGGC CCAACTATCT GGGTGCAGAT CCTGGGGCAT GAGAAGGCCA TTTATCCTTA TGAATATCCG GCGTTGTTCT CGATGATTGT CGCGTTCGTC GGCACCTGGC TGTTCTCGGT CACCGACAGC TCATTGGCTG GGCAGCAGGA GCGTGAGCGC TTCCGTTTCC AATTTGTACG TTCGCAAACC GGCCTGGGGA TTTCCCAGGG CAGTTCGCAT TAA
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Protein sequence | MKPLLSVAAL LMLPGLAFAD AISGEVHRQP LNIQAIVMFV LFVGATLYIT YWASKRTRSR QDYYTAGGKI TGLQNGLAIA GDFMSAASFL GISALVYTSG YDGLIYSIGF LIGWPIILFL IAERLRNLGR YTFADVASYR LKQKPIRTLS ACGSLVVVAL YLIAQMVGAG KLIQLLFGLN YHVAVILVGI LMVLYVLFGG MLATTWVQII KAVLLLAGAS FMALMVMKSV NFDFNTLFAE AVKVHPKGIA IMSPGGLVSD PISALSLGLA LMFGTAGLPH ILMRFFTVSD AKEARKSVFY ATGFIGYFYI LTFIIGFGAI LLVGPNPAFK DATGALLGGT NMAAVHLANA VGGNFFLGFI SAVAFATILA VVAGLTLAGA SAVSHDLYAS VIKNGKATER DELRVSKITV VILGIVAIAL GILFEKQNIA FMVGLAFSIA ASCNFPIIIL SMYWSRLTTR GAMIGGWLGL LTAVILMILG PTIWVQILGH EKAIYPYEYP ALFSMIVAFV GTWLFSVTDS SLAGQQERER FRFQFVRSQT GLGISQGSSH
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