Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Spro_0261 |
Symbol | fadB |
ID | 5606613 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Serratia proteamaculans 568 |
Kingdom | Bacteria |
Replicon accession | NC_009832 |
Strand | - |
Start bp | 290398 |
End bp | 292587 |
Gene Length | 2190 bp |
Protein Length | 729 aa |
Translation table | 11 |
GC content | 57% |
IMG OID | 640935752 |
Product | multifunctional fatty acid oxidation complex subunit alpha |
Protein accession | YP_001476499 |
Protein GI | 157368510 |
COG category | [I] Lipid transport and metabolism |
COG ID | [COG1024] Enoyl-CoA hydratase/carnithine racemase [COG1250] 3-hydroxyacyl-CoA dehydrogenase |
TIGRFAM ID | [TIGR02437] fatty oxidation complex, alpha subunit FadB |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 0.86607 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 9 |
Fosmid unclonability p-value | 0.0441662 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCTCTACC AAGGCGAAAC ATTACAACTG CACTGGCTCG ACAACGGCAT CGCCGAGCTG GTGTTCAATG CCCCAGGCTC GGTAAACAAG CTCGATACCC GCACCGTTGC CAGCCTGGGC GAAGCGCTCG CGGTGCTGGA AAAGCAGACC GAGTTGAAAG GCCTGCTGTT GCGTTCTACC AAGGCCGCCT TTATTGTCGG CGCCGACATC ACCGAATTCC TTTCGCTGTT TGCTGCCCCG GCTGAAAAGC TGCAGGAGTG GCTGAACTTC GCCAATGCGA TCTTTAACCG GCTGGAAGAT CTGCCGGTGC CGACCATTTC GGCCATTAAC GGCTATGCGC TCGGCGGCGG CTGCGAATGT ATTCTGGCGA CCGACTTCCG CGTCGCATCC CCGGATGCGC GTATCGGCCT GCCGGAAACC AAACTGGGTA TTATGCCGGG CTTCGGCGGC TCCGTTCGCT TGCCACGCCT TTTGGGTAAC GACAGCGCAC TGGAAATTAT TGCCGCCGGT AAGGACGTCA GTGCCAAAGA TGCACTGAAG GTCGGCCTGG TGGATGCGGT AGTTGCACCG GAAAAGTTGG TGGAAGCCGC GCTGAAAATG CTGCAACAGG CGATTGAGGG CAAACTGGAC TGGCGCGCCT ATCGCCAACC AAAGCTCGAG CCGTTGAAAC TCAGCCCAAT CGAAGCGGCC ATGAGCTTCA CCACCGCCAA AGGCATGGTG ATGCAAACCG CTGGCAAACA TTATCCGGCG CCGATGACCG CGGTCAAAAC CATTGAGGCC GCCGCCAGGC TGGGCCGTGA TGAAGCACTG AAACTGGAAA CCGCCAGCTT TGTGCCATTG GCCCGCTCCA AAGAGGCGCG CGCGCTGGTC GGCATCTTCC TCAATGACCA GTTTGTGAAA GGTCAGGCGA AGAAGCTGGC GAAGGGTATT GAAGCACCGA AACAGGCTGC GGTGTTGGGC GCCGGTATCA TGGGTGGCGG TATCGCCTAC CAGTCGGCTC TGAAAGGCGT GCCGGTTGTC ATGAAAGACA TCAGCGACAA ATCCCTGACT CTCGGTATGA ATGAAGCCGC CAAACTGCTG AACAAGCAGT TGGAACGCGG CAAGCTGGAC GGCATGAAGA TGGCCCAGGT GCTATCGACC ATTCAACCGA CGCTGGATTA CGCCGGTATC GAACGCGCGC AGGTGATCGT CGAAGCCGTG GTCGAGAATC CAAAGATTAA GGCGGCAGTA TTGTCCGAAG TGGAAGGCCT GATCGGTGAA AATACCGTAC TGGCGTCCAA TACCTCGACC ATTCCGATTA ATCACCTGGC GAAATCGCTG AAGCGCCCAC AGAACTTCTG CGGTATGCAC TTCTTTAATC CGGTACACCG CATGCCACTG GTGGAAATTA TCCGCGGCGA GCAGACCAGC GACAGCACTA TCGCCGCCGT GGTGGCCTAT GCCAGCCGTA TGGGTAAAAC GCCGATTGTG GTTAACGACT GCCCAGGGTT CTTCGTCAAC CGTGTACTGT TCCCGTATTT TGCCGGTTTC AGCATGTTGC TGCGCGACGG TGCGGACTTC CGCCAGATCG ATAAAGTGAT GGAAAAACAG TTTGGCTGGC CAATGGGCCC GGCTTATCTG CTCGACGTAG TGGGGATTGA TACCGCGCAC CACGCCCAGG CGGTGATGGC GGCCGGTTTC CCGGAACGCA TGGGTAAAGA TTACCGCGAC GCTATCGACG TGATGTTCGA TAACCAGCGT TTTGGTCAGA AAAACCAGTT GGGCTTCTAT CGCTACAGCC AGGACAACAA AGGCAAGCCG CGTAAAGACA ACGATGAGCA GACCGATGTG CTGCTGGCCG AAGTCAGCCA ACCGCGTCAG ACCATCAGCG ACGAAGAAAT TATCGCCCGC ATGATGATCC CGATGATTAA CGAAGTGGTG CGCTGTCTGG AAGAAAACAT TATTGCCAGC CCGGCCGAAG CCGATATGGC GCTGGTCTAC GGCATCGGTT TCCCTCCGTT CCACGGCGGG GCGTTCCGTT ACCTGGATAC GCTTGGTACC GCCAATTATG TCGAACTGGC CCAGCGTTAT GCGCATCTCG GTGCTTTGTA TCAGGTGCCT GCCGGCCTGC GCGCCAAAGC TGAACATAAT GAAAGCTACT ACCCGGTGGC AGCGCCGCTG TCCGATGTCT CCACTGGCCA ACCGGCATGA
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Protein sequence | MLYQGETLQL HWLDNGIAEL VFNAPGSVNK LDTRTVASLG EALAVLEKQT ELKGLLLRST KAAFIVGADI TEFLSLFAAP AEKLQEWLNF ANAIFNRLED LPVPTISAIN GYALGGGCEC ILATDFRVAS PDARIGLPET KLGIMPGFGG SVRLPRLLGN DSALEIIAAG KDVSAKDALK VGLVDAVVAP EKLVEAALKM LQQAIEGKLD WRAYRQPKLE PLKLSPIEAA MSFTTAKGMV MQTAGKHYPA PMTAVKTIEA AARLGRDEAL KLETASFVPL ARSKEARALV GIFLNDQFVK GQAKKLAKGI EAPKQAAVLG AGIMGGGIAY QSALKGVPVV MKDISDKSLT LGMNEAAKLL NKQLERGKLD GMKMAQVLST IQPTLDYAGI ERAQVIVEAV VENPKIKAAV LSEVEGLIGE NTVLASNTST IPINHLAKSL KRPQNFCGMH FFNPVHRMPL VEIIRGEQTS DSTIAAVVAY ASRMGKTPIV VNDCPGFFVN RVLFPYFAGF SMLLRDGADF RQIDKVMEKQ FGWPMGPAYL LDVVGIDTAH HAQAVMAAGF PERMGKDYRD AIDVMFDNQR FGQKNQLGFY RYSQDNKGKP RKDNDEQTDV LLAEVSQPRQ TISDEEIIAR MMIPMINEVV RCLEENIIAS PAEADMALVY GIGFPPFHGG AFRYLDTLGT ANYVELAQRY AHLGALYQVP AGLRAKAEHN ESYYPVAAPL SDVSTGQPA
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