Gene Spro_0229 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSpro_0229 
Symbol 
ID5606223 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSerratia proteamaculans 568 
KingdomBacteria 
Replicon accessionNC_009832 
Strand
Start bp258306 
End bp259232 
Gene Length927 bp 
Protein Length308 aa 
Translation table11 
GC content58% 
IMG OID640935720 
Productbranched-chain amino acid transporter permease subunit LivH 
Protein accessionYP_001476467 
Protein GI157368478 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0559] Branched-chain amino acid ABC-type transport system, permease components 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value0.689889 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCAGAGC AGGTTCTCTA TTTTCTGCAG CAGATGTTCA ACGGCGTCAC GTTGGGCAGC 
ACCTATGCAT TGATCGCCAT CGGTTACACC ATGGTCTACG GCATCATCGG CATGATCAAC
TTCGCCCACG GCGAGGTGTA TATGATCGGC AGCTATGTCT CCTTTATTGT TATCGCCGCC
CTGATGATGG TGGGTATCGA CGTGAGCTGG TTGCTGATTG GCGCCGGGTT CCTGGTGTCG
ATCGTCATTG CCAGCGCCTA CGGCTGGAGC ATTGAGCGGG TAGCCTACAA GCCGGTGCGC
AACTCCAAGC GTCTGATCGC GCTGATCTCC GCCATCGGGA TGTCGATATT CCTGCAAAAC
TACGTCAGCC TGACGCAGGG CTCGCGCGAT TTGGCGCTGC CTAGCCTGGT CACCGGCCAA
TGGGTGTTGG GTGAAAGTAA CGGTTTTGCC GCCACCATCA CTACCATGCA GTTGATTATC
TGGGTCGTCA CCTTCCTGGC GATGCTGGCG CTGACGATAT TCATTCGTTA TTCCCGCATG
GGCCGCGCCT GCCGTGCCTG TGCGGAAGAT TTGAAAATGG CCAGCCTGCT GGGCATCAAC
ACCGACCGGG TTATCTCACT GACCTTCGTG ATTGGCGCGG TGATGGCGGC AGTGGCCGGC
GTGCTGCTGG GCCAGTTCTA CGGAGTGATT AACCCATACA TCGGCTTTAT GGCAGGCATG
AAAGCCTTCA CCGCGGCGGT GCTGGGCGGT ATCGGCAGCA TTCCCGGCGC AATGATTGGT
GGCCTGGTAC TGGGCGTGGC GGAAGCGCTG ACCTCGGCCT ACCTGAGCAC CGAATATAAA
GACGTGGTGT CGTTCGCGCT GCTGATCGTG GTGTTGCTGA TCATGCCAAC CGGCATCCTT
GGGCGTCCGG AGGTTGAGAA GGTATGA
 
Protein sequence
MSEQVLYFLQ QMFNGVTLGS TYALIAIGYT MVYGIIGMIN FAHGEVYMIG SYVSFIVIAA 
LMMVGIDVSW LLIGAGFLVS IVIASAYGWS IERVAYKPVR NSKRLIALIS AIGMSIFLQN
YVSLTQGSRD LALPSLVTGQ WVLGESNGFA ATITTMQLII WVVTFLAMLA LTIFIRYSRM
GRACRACAED LKMASLLGIN TDRVISLTFV IGAVMAAVAG VLLGQFYGVI NPYIGFMAGM
KAFTAAVLGG IGSIPGAMIG GLVLGVAEAL TSAYLSTEYK DVVSFALLIV VLLIMPTGIL
GRPEVEKV