| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Spro_0224 |
|---|
| Symbol | |
|---|
| ID | 5606111 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Serratia proteamaculans 568 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009832 |
|---|
| Strand | + |
|---|
| Start bp | 252100 |
|---|
| End bp | 252957 |
|---|
| Gene Length | 858 bp |
|---|
| Protein Length | 285 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 54% |
|---|
| IMG OID | 640935715 |
|---|
| Product | RNA polymerase factor sigma-32 |
|---|
| Protein accession | YP_001476462 |
|---|
| Protein GI | 157368473 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG0568] DNA-directed RNA polymerase, sigma subunit (sigma70/sigma32) |
|---|
| TIGRFAM ID | [TIGR02392] alternative sigma factor RpoH
[TIGR02937] RNA polymerase sigma factor, sigma-70 family |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 29 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 10 |
|---|
| Fosmid unclonability p-value | 0.0696164 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACCAAAG AAATGCAAAC TTTAGCTTTA GTGCCCCAGG GCAGTTTGGA AGCCTATATC
CGGGCCGCCA ACACCTATCC GATGCTGACG GCAGAGGAAG AGCGGGAGCT GGCTGAACGG
CTGCATTATC AGGGCGATCT GGAAGCCGCT AAGCAGCTGA TCCTGTCTCA CCTGCGCTTT
GTCGCTCATA TTGCCCGCAA TTACTCTGGT TACGGCCTGC CGCAGGCGGA TCTGATCCAG
GAAGGTAATA TCGGCTTGAT GAAAGCTGTT CGCCGCTTCA ACCCAGAGGT TGGGGTGCGC
CTGGTTTCCT TTGCGGTGCA CTGGATCAAG GCAGAAATTC ACGAGTACGT ACTGCGCAAC
TGGCGTATCG TCAAAGTTGC TACCACCAAG GCACAGCGCA AGCTGTTCTT TAACCTGCGT
AAAACCAAGC AGCGTCTGGG CTGGTTCAAC CAGGACGAGG TGGAATTGGT GGCCCGTGAA
CTGGGCGTGA CCAGCAAGGA CGTACGCGAG ATGGAATCTC GCATGGCGGC ACAGGATATG
ACTTTCGATC CAACGCCGGA CGACGACGCC CGTGAAGGCC AGTCGATGGC ACCAGTGCTG
TACCTGCAGG ATAAAAGCTC TGACTTTGCT GAAGGTATCG AAGAAGATAA CTGGGAAAGC
AACGCCGCAG ACAAACTGGC CTACGCGATG GAAGGCCTGG ACGAGCGTAG TCAGCATATT
ATTCGTGCCC GTTGGCTGGA CGACGATAAC AAGTCCACGC TGCAAGAGCT GGCCGATCAA
TATGGCGTTT CCGCTGAGCG TGTTCGCCAG TTGGAAAAAA ATGCCATGAA GAAACTGAAA
ATGGCGATCG AAGCCTAA
|
|---|
| Protein sequence | MTKEMQTLAL VPQGSLEAYI RAANTYPMLT AEEERELAER LHYQGDLEAA KQLILSHLRF
VAHIARNYSG YGLPQADLIQ EGNIGLMKAV RRFNPEVGVR LVSFAVHWIK AEIHEYVLRN
WRIVKVATTK AQRKLFFNLR KTKQRLGWFN QDEVELVARE LGVTSKDVRE MESRMAAQDM
TFDPTPDDDA REGQSMAPVL YLQDKSSDFA EGIEEDNWES NAADKLAYAM EGLDERSQHI
IRARWLDDDN KSTLQELADQ YGVSAERVRQ LEKNAMKKLK MAIEA
|
|---|
| |