Gene Spro_0202 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSpro_0202 
SymbolglpC 
ID5605659 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSerratia proteamaculans 568 
KingdomBacteria 
Replicon accessionNC_009832 
Strand
Start bp227900 
End bp229099 
Gene Length1200 bp 
Protein Length399 aa 
Translation table11 
GC content58% 
IMG OID640935693 
Productsn-glycerol-3-phosphate dehydrogenase subunit C 
Protein accessionYP_001476440 
Protein GI157368451 
COG category[C] Energy production and conversion 
COG ID[COG0247] Fe-S oxidoreductase 
TIGRFAM ID[TIGR03379] glycerol-3-phosphate dehydrogenase, anaerobic, C subunit 


Plasmid Coverage information

Num covering plasmid clones32 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0158986 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCCTGC ATAAAGACAA CAGTTTTGAG AATTGCATCA AATGTACCGT CTGTACCACC 
TATTGTCCGG TGGCCAAGGT GAATCCGCTC TATCCGGGGC CAAAACAGGC GGGGCCGGAC
GGTGAGCGCC TGCGACTGAA AGATCCGGCG CTGTATGATG AGGCGCTGAA ATATTGCACC
AACTGCAAAC GCTGTGAAGT GGCCTGTCCG TCCGACGTCA AAATCGGCGA CATCATTCAG
CGCGCCCGCG CCGACTTTGC CCAGAGCAAG CCCACGCTGC GTGACGCTAT CCTCAGCCAT
ACCGATCTCA TGGGCTCGCT GTCGACGCCA TTTGCGCCGA TTGTTAATGC CGCTACCGGG
CTTAAGCCGG TGCGTGCCCT GCTCGACAAG GCGCTGAAGA TTGATCATCG CCGCGAACTG
CCCAAATACT CGTTCGGTAC CTTCCGCCGC TGGTACCGTC AGCAGGCGCA GGCCCAACGG
CGTTATGCCG AGCAGGTCGC GTTCTTCCAC GGCTGCTTCG TTAATTACAA CCATCCGCAA
CTGGGCAAGG ATCTGATCAA GGTCTTTAAT GCGATGGACA TCGGCGTGCA GTTGCTCAAG
CGGGAGAAAT GCTGCGGCGT ACCGCTGATC GCCAACGGTT TTATCGCCCA GGCCAGGAAA
CAGGCCAAAG TGAACGCCGA ATCGCTGCAC GAGACGGTGT TGGAGCGGGG TATCCCGGTC
GTGGCAACCT CATCGAGCTG TACTTTTACC CTGCGTGATG AATACCCGCA CCTGCTGGAC
GTGGACACCT CGGCGGTGCG TGAACGGGTG GAGCTGGCGA CGCGCTATCT GTACCGCCTG
ATCAATCAAG GGCGCCAGCT GCCGTTGAAG CACACGCCGC TGCGGGTGGC CTATCATACG
CCATGCCATA TGGAAAAAAT GGGCTGGACC GCCTATACGC TGGAGCTGTT GCGGCAGATA
CCGGGGCTGG AACTGGTGGT GCTGGACTCG CAGTGCTGCG GTATTGCCGG CACCTATGGT
TTTAAATCGG AGAACTATGA GACATCGCAG GGCATTGGTG CGTCGCTGTT CCGCCAGATA
GAGGAGAGCG GGGTGGATTT GGTGGTGACT GACTGCGAAA CCTGCAAATG GCAAATCGAG
ATGTCGACCA GCAAGCGCTG CGAACATCCG ATCACTCTGC TGGCGCAGGC ATTGGCTTAA
 
Protein sequence
MSLHKDNSFE NCIKCTVCTT YCPVAKVNPL YPGPKQAGPD GERLRLKDPA LYDEALKYCT 
NCKRCEVACP SDVKIGDIIQ RARADFAQSK PTLRDAILSH TDLMGSLSTP FAPIVNAATG
LKPVRALLDK ALKIDHRREL PKYSFGTFRR WYRQQAQAQR RYAEQVAFFH GCFVNYNHPQ
LGKDLIKVFN AMDIGVQLLK REKCCGVPLI ANGFIAQARK QAKVNAESLH ETVLERGIPV
VATSSSCTFT LRDEYPHLLD VDTSAVRERV ELATRYLYRL INQGRQLPLK HTPLRVAYHT
PCHMEKMGWT AYTLELLRQI PGLELVVLDS QCCGIAGTYG FKSENYETSQ GIGASLFRQI
EESGVDLVVT DCETCKWQIE MSTSKRCEHP ITLLAQALA