Gene Spro_0186 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSpro_0186 
SymboluvrD 
ID5605447 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSerratia proteamaculans 568 
KingdomBacteria 
Replicon accessionNC_009832 
Strand
Start bp209133 
End bp211304 
Gene Length2172 bp 
Protein Length723 aa 
Translation table11 
GC content60% 
IMG OID640935677 
ProductDNA-dependent helicase II 
Protein accessionYP_001476424 
Protein GI157368435 
COG category[L] Replication, recombination and repair 
COG ID[COG0210] Superfamily I DNA and RNA helicases 
TIGRFAM ID[TIGR01075] DNA helicase II 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGTGCCTA TGGACGTTTC CGATCTGCTC GACAGCCTGA ATGAAAAACA ACGCGAAGCG 
GTGGCGGCGC CACGTGGCAA CCTGTTGGTA CTGGCCGGCG CGGGCAGCGG TAAAACCCGG
GTGCTGGTGC ATCGCATCGC CTGGCTGCTG GCGGTAGAGA ACTGCTCGCC GTATTCCATT
ATGGCGGTGA CCTTCACCAA CAAGGCGGCG GCGGAAATGC GCCACCGTAT CGAACACCTG
ATTGGCACCA GCCAGGGCGG CATGTGGATT GGTACCTTCC ACGGCCTGGC TCATCGGCTG
CTGCGCGCTC ATCATTTGGA TGCCAACCTG CCGCAGGATT TCCAAATTCT TGACAGCGAC
GACCAGTTCC GCCTGCTCAA GCGTATCGTC AAAGCGCTGA ATATCGACGA GAAGCAATGG
CCGCCGCGTC AGGCAATGTG GTACATCAAC GGCAAAAAAG ATGAGGGCCT GCGCCCGCAG
CACGTTGAAA CCTACAACAA CCCGGTGGAA GCGACCTGGC TGCGTATCTA CCAGGCCTAC
CAGGAAGCCT GCGATCGCGC CGGGCTGGTG GACTTTGCCG AGCTGTTGCT GCGTGCCCAT
GAGCTGTGGC TGAACAAGCC GCATATCCTC AATCATTACC GCGAACGCTT CACCAACGTG
CTGGTGGACG AGTTTCAGGA TACCAACAGC ATTCAGTACG CCTGGATCCG CCTGCTGGCC
GGCAATAACA GCAACGTGAT GATCGTCGGC GACGATGACC AGTCGATCTA CGGTTGGCGC
GGCGCTCAGG TGGAAAATAT CCAACGCTTC CTGAAGGATT TCCCCGGTGC GCAAAGCGTA
CTTCTGGAAC AGAACTACCG TTCGACCAGC AATATCCTGA AATCGGCCAA TACCCTGATC
GCCAACAACG GCGGGCGCAT GGGGAAAAAT CTGTGGACCG AAGGCGGCGA AGGCGAGCCT
ATCTCAGTCT ACTGTGCCTT CAACGAGCTG GATGAATCGC GCTTCGTAGT GGGCCGTATC
AAAGCCTGGC AGGAAAACGG CGGTGCGCTG AATGATTGCG CCATCCTTTA TCGCAGCAAT
GCCCAGTCGC GCGTACTGGA AGAGGCGCTG CTGCAAACGG CGATGCCATA CCGCATTTAC
GGCGGGCAAC GCTTCTTCGA GCGTCAGGAG ATCAAAGATG CCCTGGCCTA CCTGCGGCTG
ATAGCCAACC GCAACGACGA TGCTGCCTTC GAACGCGTGG TGAATACACC GACGCGCGGC
ATTGGCGACC GGACGCTGGA CGAGGTGCGC CGCACGGCCC GCGATCGTCA ATTGACCATG
TGGCAGGCCA CCCGCGTGCT GCTACAGGAC AAAGTGCTGG CCGGGCGTGC GGCATCCGCG
CTGCAACGCT TTACCGAACT GTTGGACTCA CTGGCGCACG AAACCGCCGA TATGCCACTG
CACGTTCAGA CCGATCGGGT GATCCGCGAT TCGGGGCTGT TCATTATGTA TGAGCAGGAG
AAGGGCGAAA AAGGTCAGGC ACGTATCGAA AACCTTGAGG AACTGGTGAC GGCAACGCGC
CAGTACAGCT ATCAGGATGA AGATCAGGAT CTGATGCCGC TGCAGGCGTT TCTGTCACAT
GCTGCGCTGG AAGCGGGCGA GGGGCAGGCC GATGCCTATC AGGACGCGGT GCAGTTGATG
ACCCTGCACT CGGCCAAGGG GCTGGAGTTC CCGCAGGTGT TTATCGTCGG CATGGAAGAG
GGGATGTTCC CGAGCCAAAT GTCGCTGGAC GAAGGCGGCA GGCTGGAAGA AGAGCGCCGT
CTGGCCTACG TTGGGTTGAC CCGCGCCATG CAGAAACTGA CGCTGACCTA TGCCGAAACC
CGGCGTCTGT ACGGCAAAGA GGTGTATCAC CGGCCTTCAC GTTTCATCGG CGAACTGCCG
GAGGAGTGTG TGGAAGAAGT GCGTTTGCGC GCCAGCGTCT CACGGCCGGC GAATCATCGC
CGCATGGGCA CGCCGATCAG CGAAAACGAC ACCGGTTACA AGCTGGGCCA GCGAGTGCGC
CACCCCAAGT TTGGCGAAGG GACTATCGTC AATCTGGAAG GCAGCGGCGA ACACAGCCGG
CTGCAGATTG CTTTTCCGGG TGAAGGCATC AAGTGGCTGG TGGCCGCTTA CGCCCGTCTG
GAGACGGTGT AA
 
Protein sequence
MVPMDVSDLL DSLNEKQREA VAAPRGNLLV LAGAGSGKTR VLVHRIAWLL AVENCSPYSI 
MAVTFTNKAA AEMRHRIEHL IGTSQGGMWI GTFHGLAHRL LRAHHLDANL PQDFQILDSD
DQFRLLKRIV KALNIDEKQW PPRQAMWYIN GKKDEGLRPQ HVETYNNPVE ATWLRIYQAY
QEACDRAGLV DFAELLLRAH ELWLNKPHIL NHYRERFTNV LVDEFQDTNS IQYAWIRLLA
GNNSNVMIVG DDDQSIYGWR GAQVENIQRF LKDFPGAQSV LLEQNYRSTS NILKSANTLI
ANNGGRMGKN LWTEGGEGEP ISVYCAFNEL DESRFVVGRI KAWQENGGAL NDCAILYRSN
AQSRVLEEAL LQTAMPYRIY GGQRFFERQE IKDALAYLRL IANRNDDAAF ERVVNTPTRG
IGDRTLDEVR RTARDRQLTM WQATRVLLQD KVLAGRAASA LQRFTELLDS LAHETADMPL
HVQTDRVIRD SGLFIMYEQE KGEKGQARIE NLEELVTATR QYSYQDEDQD LMPLQAFLSH
AALEAGEGQA DAYQDAVQLM TLHSAKGLEF PQVFIVGMEE GMFPSQMSLD EGGRLEEERR
LAYVGLTRAM QKLTLTYAET RRLYGKEVYH RPSRFIGELP EECVEEVRLR ASVSRPANHR
RMGTPISEND TGYKLGQRVR HPKFGEGTIV NLEGSGEHSR LQIAFPGEGI KWLVAAYARL
ETV