Gene Spro_0166 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSpro_0166 
Symbol 
ID5605234 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSerratia proteamaculans 568 
KingdomBacteria 
Replicon accessionNC_009832 
Strand
Start bp187911 
End bp188792 
Gene Length882 bp 
Protein Length293 aa 
Translation table11 
GC content54% 
IMG OID640935653 
Productglucose-1-phosphate thymidylyltransferase 
Protein accessionYP_001476404 
Protein GI157368415 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG1209] dTDP-glucose pyrophosphorylase 
TIGRFAM ID[TIGR01207] glucose-1-phosphate thymidylyltransferase, short form 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.455037 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAGGTA TTATTCTGGC GGGCGGTTCC GGCACACGCT TGCATCCGAT TACCCGCGGC 
GTATCCAAAC AGCTATTACC TATTTACGAC AAGCCGATGA TTTATTATCC ACTGTCAGTT
TTGATGCTGG CGGGGATCCG CGACATTTTA ATCATCTCTA CCCCAGAAGA TTTACCCTCG
TTCAAACGCT TATTGGGCAG CGGCGAAGAG TTCGGCATTA ACCTCAGTTA TGCCGAACAA
CCCAGTCCTG ACGGCCTGGC GCAGGCATTT TTGATTGGCG AAGAATTCCT CGCCGGCGAG
CCGAGCTGCC TGGTGCTGGG TGACAACATT TACTTTGGCC AGGGCTTTAG TCCGAAACTG
AAGACGGTTG CCGCCCGTAC GCAGGGCGCT ACCGTGTTCG GTTATCAGGT AATGGATCCC
GAGCGCTTTG GCGTGGTGGA GTTTGATGAT AATTTCCGCG CGCTGTCGAT CGAAGAAAAG
CCGAAAGCGC CTAAATCCAA TTGGGCGGTG ACCGGGCTGT ATTTCTACGA CAGCCAGGTT
GTGGAGTTCG CCAAACAGGT GAAACCTTCG GAGCGCGGCG AACTGGAGAT CACCAGCATT
AACCAGATGT ATCTGGAGCG TGGTGAACTG ACGGTTGAAC TGTTGGGGCG CGGTTTCGCC
TGGCTGGATA CCGGCACACA TGACAGCCTG CTGGAAGCCA GCAGCTTTGT GCAGACGGTG
GAAAAACGTC AGGGCTTTAA AATTGCCTGT CTGGAAGAAA TTGCCTGGCG TAACGGCTGG
CTGGACGATG AGGGCGTGAA ACGCGCCGCA CAATCGTTGC TCAAAACCGG TTATGGAAAA
TATCTGCTGG ATCTGCTGCA TGCACGCCCA CGCCAGTATT GA
 
Protein sequence
MKGIILAGGS GTRLHPITRG VSKQLLPIYD KPMIYYPLSV LMLAGIRDIL IISTPEDLPS 
FKRLLGSGEE FGINLSYAEQ PSPDGLAQAF LIGEEFLAGE PSCLVLGDNI YFGQGFSPKL
KTVAARTQGA TVFGYQVMDP ERFGVVEFDD NFRALSIEEK PKAPKSNWAV TGLYFYDSQV
VEFAKQVKPS ERGELEITSI NQMYLERGEL TVELLGRGFA WLDTGTHDSL LEASSFVQTV
EKRQGFKIAC LEEIAWRNGW LDDEGVKRAA QSLLKTGYGK YLLDLLHARP RQY