| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Spro_0108 |
|---|
| Symbol | |
|---|
| ID | 5603187 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Serratia proteamaculans 568 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009832 |
|---|
| Strand | + |
|---|
| Start bp | 116464 |
|---|
| End bp | 117633 |
|---|
| Gene Length | 1170 bp |
|---|
| Protein Length | 389 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 49% |
|---|
| IMG OID | 640935594 |
|---|
| Product | integrase family protein |
|---|
| Protein accession | YP_001476346 |
|---|
| Protein GI | 157368357 |
|---|
| COG category | [L] Replication, recombination and repair |
|---|
| COG ID | [COG0582] Integrase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 22 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 22 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCTCCTAA CTGACATACA AATCCGACGT TCCAAACCGC AAGAAAAGCC CTATACCCTC
AACGATGGTC AAGGCTTGTC CCTTCTTATC AATACTGACG GCAGTAAAGG CTGGCGCTTT
CGCTATCGCT ATGCCGGAAA AGCCAAGTTG ATGTCCTTTG GCACCTACCC CTTGGTAACG
CTGGCTGAGG CGCGAGAAAA GCGTGGGGAA GCCCGTAAGC AGGTTGCGAA TGGCATTGAC
CCAGTGGCAG ATAAAAAGGC GCAAAAGCTC GCGCAGAAAC TTTCTTTCGA GAACTCCTTT
GAAGCGATTA GCCGTGAATG GCATACGAAC AAGGCTGACC GTTGGACTCT AGCCTACAGG
GAAGAGATCA TGCGTACCTT TGAGCAGGAT GTGTTCCCTC ATATTGGCCA ACGCCCCATT
GCCGAAATTA AGCCCTTGGA ACTGCTGGAA GTACTGCGGC GTATTGAAAA ACGCGGAGCA
TTGGAGAAGA CCCGCAAGAT TCGCCAGCGC TGTGGAGAGG TATTTCGTTA TGCAATTATT
ACCGGTAGGG CGGAGTATAA CCCAGCCCCA GATCTCGCCA GCGCGCTAGC CGTTCCCAAA
CAAAAGCACC ATCCGTTCCT TTCGGCCGAG GAACTACCTT ACTTTGTTAA GGATTTGGAA
GGATATACCG GTAGCATCAT CACTAAGAAT GCAGCGAAGA TCGTTATGCT GACCGGCGTG
CGCACGCAAG AAATGCGCTT TGCCACGTGG GAAGAGATCG ATTTTGAGCG TGCAATCTGG
GAGATCCCCG CAGCACGCAT GAAAATGCGC CGCCTGCACA TTGTGCCGCT CTCTACTCAG
GTGGTTGAGC TGTTCAAACA GCTACAACCG ATCACCGGTC ACTATCCTTA CATTTTCATT
GGACGAAACA ACCGCAGAAA GCCTATAAGT AAGGAAAGTG TGAATCAGGT TATAGAGCTG
CTGGGATATA AGGGGCGAGC CACCGGTCAC GGTTTCAGGC ATACGATGTC CACTATCCTA
CATGAACAAG GGTTTGATTC CGCATGGATT GAGATGCAAC TTGCGCATGT TGACAAGAAT
GGTATTCGAG GTACTTATAA TCATGCTCAA TATTTTGCTC AGCGACAGTC TATGATGCAA
TGGTATTCTG ACAATATTTT AGTGTTATGA
|
|---|
| Protein sequence | MLLTDIQIRR SKPQEKPYTL NDGQGLSLLI NTDGSKGWRF RYRYAGKAKL MSFGTYPLVT
LAEAREKRGE ARKQVANGID PVADKKAQKL AQKLSFENSF EAISREWHTN KADRWTLAYR
EEIMRTFEQD VFPHIGQRPI AEIKPLELLE VLRRIEKRGA LEKTRKIRQR CGEVFRYAII
TGRAEYNPAP DLASALAVPK QKHHPFLSAE ELPYFVKDLE GYTGSIITKN AAKIVMLTGV
RTQEMRFATW EEIDFERAIW EIPAARMKMR RLHIVPLSTQ VVELFKQLQP ITGHYPYIFI
GRNNRRKPIS KESVNQVIEL LGYKGRATGH GFRHTMSTIL HEQGFDSAWI EMQLAHVDKN
GIRGTYNHAQ YFAQRQSMMQ WYSDNILVL
|
|---|
| |