Gene Spro_0092 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSpro_0092 
Symbol 
ID5606987 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSerratia proteamaculans 568 
KingdomBacteria 
Replicon accessionNC_009832 
Strand
Start bp97654 
End bp98901 
Gene Length1248 bp 
Protein Length415 aa 
Translation table11 
GC content60% 
IMG OID640935577 
Productmajor facilitator transporter 
Protein accessionYP_001476330 
Protein GI157368341 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG2814] Arabinose efflux permease 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAACAA CATTACCACC TGCGGCTCGC TTGGGTCGAC AGGCGCTTTT ATTCCCTCTT 
TGTCTGGTGC TGTTCGAGTT CGCCACCTAT ATCGCCAACG ATATGATCCA GCCTGGCATG
CTGGCGGTGG TGGCAGATTT CAACGCCGGA GAAGAGTGGG TGCCAACCTC AATGACCGCC
TATCTGGCCG GCGGTATTTT CCTGCAGTGG CTGCTGGGGC CATTGTCGGA TCGCCGTGGT
CGTCGCCCGG TGATGCTGGC GGGTGTGGCG TTCTTTATCG TCGCCTGCCT GGCGATTTTG
CTGGTGACCA GCATCGAGCA ATTTATCTTT ATGCGTTTCC TGCAGGGGAT TGGCCTGTGC
TTTATCGGCG CGGTCGGCTA CGCCACGATA CAGGAATCTT TTGAGGAATC TGTGTGCATA
AAAATCACCG CACTGATGGC CAACGTGGCG CTGATTGCCC CGTTGCTCGG GCCATTGGCC
GGTGCTGCGC TGATCCACGT CGCGCCGTGG CAGAGCATGT TCGTGCTGTT CGCGGCGCTG
GCGGCCTTTG CCTTCTATGG CCTGTGGAAA GCGATGCCGG AAACCGCGTC GCTGCAGGGT
GAGAAACTCT CGGCCGCCAA CCTGTGGCGT GACTATCGCC AGGTGCTGTC CAACCGTCGT
TTTGTCTGCG GGGCGCTGGC CATTGGCTTC GCCAGCCTGC CGCTGCTGGC CTGGATTGCC
CAATCACCGG TGATCCTGAT CAGCGGCGAG TCGCTGTCGA CGCTCGATTA CGGCCTGCTG
CAAATTCCGG TGTTCGGTGC GCTGATCCTC GGCAACCTGA CGCTGGCGCG TTTGACCGGT
AAAAACAGCG TACAACGCCT GATCAAACTG GGTGCAGGGC CAATGATGCT GGGGCTGCTG
ATCGCGGCGC TGGCTACCCT GTTCTCGACC CACGCCTACC TGTGGATGAC CGCAGGCCTG
AGCCTGTACG CCTACGGTAT CGGGCTGGCC AACGCCGGGC TGTACCGCCT GACGCTGTTC
TCAAGCTCCG TCAGCAAAGG CACGGTTTCC GCCACCATGG GCATGTTGAG CATGATGGTA
TTCACCGTCG GCATAGAACT GGCGAAAGTG GCCTACGTGT GGGGCGGCAG CGGGTTGTTC
AATCTGTTCA ACCTGATTAG CGGCCTGTGC TGGCTGGCGC TGGTAGCGCT GTTCCTCAGC
AAACGCCGCA GCGGCGACGC AACGCCGACG CCTAACGCCG CATTGTAA
 
Protein sequence
MKTTLPPAAR LGRQALLFPL CLVLFEFATY IANDMIQPGM LAVVADFNAG EEWVPTSMTA 
YLAGGIFLQW LLGPLSDRRG RRPVMLAGVA FFIVACLAIL LVTSIEQFIF MRFLQGIGLC
FIGAVGYATI QESFEESVCI KITALMANVA LIAPLLGPLA GAALIHVAPW QSMFVLFAAL
AAFAFYGLWK AMPETASLQG EKLSAANLWR DYRQVLSNRR FVCGALAIGF ASLPLLAWIA
QSPVILISGE SLSTLDYGLL QIPVFGALIL GNLTLARLTG KNSVQRLIKL GAGPMMLGLL
IAALATLFST HAYLWMTAGL SLYAYGIGLA NAGLYRLTLF SSSVSKGTVS ATMGMLSMMV
FTVGIELAKV AYVWGGSGLF NLFNLISGLC WLALVALFLS KRRSGDATPT PNAAL