Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Spro_0041 |
Symbol | |
ID | 5607209 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Serratia proteamaculans 568 |
Kingdom | Bacteria |
Replicon accession | NC_009832 |
Strand | + |
Start bp | 42130 |
End bp | 42888 |
Gene Length | 759 bp |
Protein Length | 252 aa |
Translation table | 11 |
GC content | 55% |
IMG OID | 640935526 |
Product | GntR domain-containing protein |
Protein accession | YP_001476279 |
Protein GI | 157368290 |
COG category | [K] Transcription |
COG ID | [COG2186] Transcriptional regulators |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 37 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 14 |
Fosmid unclonability p-value | 0.340559 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGGGAGACG CGGGTAAAGT AAATCCGTTA TCACAGCATG GCGAACGCCA CGGAGAAATC ATGAACAAGC AGCAGATCGG TAAAACCGAC CGCATCATTA TCGAGATGGG CCAGCAGATC GTCGGCGGTA AGTATATTCC GGGGGCGGCA TTACCCGCAG AAACGGAACT GTGCGAAGAG TTTGAAACTT CGCGCAATAT CATCCGCGAA GTCTTGCGTG CGCTGATGTC CAAGCGGTTG GTGGAGGTGA AGCGCTATCG TGGCGCATTC GTAACGCTAC GCAGCCAGTG GAATTATCTG GATACCGACG TCCTGAACTG GGTGCTGGCG CAGGATTATG ATCCACGGCT GATCGCCTCG ATGAGTGAGG TTCGTAACCT GGTGGAGCCA ACGATTGCTC GCTGGGCGGC GGAGCGAGCT ACCTCTAGCG AACTTGCGGT GATCGAAGCG GCGCTGAACG ATATGAAAAT CCATCACCAG GATCGCGAAC GTTTTAATGA GGCCGACATC CGCTATCACG AAGCGGTGCT GGCGGCGGTG CACAACCCGG TTTTGCAACA GCTTAGCGTG GCGATTAGCT CGCTGCAGCG CGCGGTGTTC GAGCGCACTT ATATGTCGGA TGAGAACAAT ATGCCGCGTA CCTTGCGCGA GCATCAGGAA TTGTATGATG CGATCCGTCA TCAGGATCCG GATGCCGCAG AGCAGGCGGC ACTGGCAATG ATCGCCAGCT CAACCAAACG CCTAAAGGAC ATAACATGA
|
Protein sequence | MGDAGKVNPL SQHGERHGEI MNKQQIGKTD RIIIEMGQQI VGGKYIPGAA LPAETELCEE FETSRNIIRE VLRALMSKRL VEVKRYRGAF VTLRSQWNYL DTDVLNWVLA QDYDPRLIAS MSEVRNLVEP TIARWAAERA TSSELAVIEA ALNDMKIHHQ DRERFNEADI RYHEAVLAAV HNPVLQQLSV AISSLQRAVF ERTYMSDENN MPRTLREHQE LYDAIRHQDP DAAEQAALAM IASSTKRLKD IT
|
| |