Gene Spea_4254 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSpea_4254 
Symbol 
ID5664638 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella pealeana ATCC 700345 
KingdomBacteria 
Replicon accessionNC_009901 
Strand- 
Start bp5167442 
End bp5168086 
Gene Length645 bp 
Protein Length214 aa 
Translation table11 
GC content43% 
IMG OID641238922 
Productlysine exporter protein LysE/YggA 
Protein accessionYP_001504099 
Protein GI157964065 
COG category[E] Amino acid transport and metabolism 
COG ID[COG1280] Putative threonine efflux protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones41 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGATGATCG ATCTAGCTTT ACTCCCACTG TATCTAACAA CAGTCATCGC CCTACTACTG 
ATCCCGGGGC CGGATATGTT ACTGATAGCT AGCTCAAGCT TAAGCTATGG CCGTAAAGTT 
GGCGTGTATG CCAGTTTTGG TAATGCAACC TCGGGGCTTA TTTTAACGCT ATTGGCAGCG 
ATGGGAGTAT CGGCCGTTAT CGCCATGAAC CCAATGGCCT TGGAAGTCCT GAGAGTTTTA 
GGTGGTGCCT ATCTATTAAA GATGGGCTGG GACTGTATGC GCAGTTCGGC AGCTGAAGCA 
CCAGAAATAG AACAACAAAA TAATCTCGCC AAACTTTTAT ATCGCCGAGC AGTAGTGAGC 
AACCTACTAA ACCCTAAAGC ATTGATATTT TTTGTGCTGT TTTTGCCTCA ATTTGTTTCA 
ACCCAATTAA CCGCTAGCTC AGGTGAGCAA ATGCTTGCCC TTGGCTTATT ACTTAACGTG 
ATGGGATTAG CCTTTAATCT ATTGCTGGTG GCTCTAGTTG GCTCAGTTGG TAAGCCACTA 
CTCAAAAATG AAAAATTCAG AACTTATCAA AACAAGTTTA TGGGTATGAT CTTCTTTGTT 
CTGGCTATTT GGTTGCTCGC TTCTCAAGTG CAAAACATCA GTTAA
 
Protein sequence
MMIDLALLPL YLTTVIALLL IPGPDMLLIA SSSLSYGRKV GVYASFGNAT SGLILTLLAA 
MGVSAVIAMN PMALEVLRVL GGAYLLKMGW DCMRSSAAEA PEIEQQNNLA KLLYRRAVVS 
NLLNPKALIF FVLFLPQFVS TQLTASSGEQ MLALGLLLNV MGLAFNLLLV ALVGSVGKPL 
LKNEKFRTYQ NKFMGMIFFV LAIWLLASQV QNIS