| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Spea_4235 |
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| Symbol | |
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| ID | 5664619 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella pealeana ATCC 700345 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009901 |
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| Strand | - |
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| Start bp | 5147965 |
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| End bp | 5148771 |
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| Gene Length | 807 bp |
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| Protein Length | 268 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 641238903 |
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| Product | DeoR family transcriptional regulator |
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| Protein accession | YP_001504080 |
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| Protein GI | 157964046 |
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| COG category | [G] Carbohydrate transport and metabolism
[K] Transcription |
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| COG ID | [COG1349] Transcriptional regulators of sugar metabolism |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.00275113 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGTATCTTT CGAACCGAAA CTTAGCGAAA GGTTTTATGA ATAAACGAAA CACTCAACAG
CGACGCCACA GCATTATTAG CCTGCTTAAT CAGCAAGGCG AGGTGAGTGT TGAGGAGTTA
TCCTTACGTT TCGAAACCTC TGAAGTCACC ATTCGTAAAG ACTTAGCCAC CCTAGAGAAG
AGCGGCCTAT TGCTACGCCG TTATGGTGGA GCTGTCGCCG TGCCAGATGA GGTGATGCAG
CAGTTCTCTG CCAAGATAGC GCCTAACAAG CTATCTATCG CTAGAGCCGC TGCTGAATTA
ATTAAAGATC ATAATCGCAT CATCATCGAT AGCGGCAGCA CCACATCAGG CTTGATCGGT
GAGCTTAACA GTAAACGTGG TTTACTGGTG ATGACCAACT CATTGGCCTT GGCTAATGCG
ATTCACGACC TTGAAAACGA GCCGACCTTA TTGATGACTG GAGGGACCTG GGACCCTCAC
TCTGAGTCCT TCCAGGGCCA GATTGCCGAG CAAGTACTAC GGTCTTACAA CTTCGATCAA
CTGTTTATCG GTGCAGACGG TATCGATCTT CAGCGTGGAA CTACAACCTT CAACGAACTA
ACCGGCTTAA GTAAGGTAAT GGCCGAAGTA TCACGTGAAG TGGTGGTGAT GCTCGAGTCA
GAAAAGCTGG GTCGTCGTAT TCCTAATCTT GAGCTACCTT GGAGCAAGAT TAGTGTGCTG
GTAACAGACG ATAAGTTGCC AAGCGAAGCG CTAGAGACAA TTTCTAACCA TGGGGTGCGA
GTCATTCTTG CACCTTATGC AGGGTAA
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| Protein sequence | MYLSNRNLAK GFMNKRNTQQ RRHSIISLLN QQGEVSVEEL SLRFETSEVT IRKDLATLEK
SGLLLRRYGG AVAVPDEVMQ QFSAKIAPNK LSIARAAAEL IKDHNRIIID SGSTTSGLIG
ELNSKRGLLV MTNSLALANA IHDLENEPTL LMTGGTWDPH SESFQGQIAE QVLRSYNFDQ
LFIGADGIDL QRGTTTFNEL TGLSKVMAEV SREVVVMLES EKLGRRIPNL ELPWSKISVL
VTDDKLPSEA LETISNHGVR VILAPYAG
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