Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Spea_4202 |
Symbol | |
ID | 5664586 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella pealeana ATCC 700345 |
Kingdom | Bacteria |
Replicon accession | NC_009901 |
Strand | - |
Start bp | 5098178 |
End bp | 5099185 |
Gene Length | 1008 bp |
Protein Length | 335 aa |
Translation table | 11 |
GC content | 48% |
IMG OID | 641238866 |
Product | ABC transporter related |
Protein accession | YP_001504047 |
Protein GI | 157964013 |
COG category | [V] Defense mechanisms |
COG ID | [COG1131] ABC-type multidrug transport system, ATPase component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 0.933672 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAGCCAGT CGGTCATCAA AAGTAGCCAG TCGGCCAGCC TGAATGATCG TCCGGTCATC AAAAGCGGTC AGTCAGCAAG CAAGAGTAAT AATCCGGTCA TCAAAACCAA AGGTCTATGT CGTCATTTTG GTAGCTTAAA GGCAATCGAT GACCTCGATT TTGAGGTCGA AAAAGGCCAA ATCTATGGTT TTCTCGGCCC TAATGGCTGC GGCAAGACCA CGGCTATTCG TATGCTCACC GGTCTACTGT TGCCAACCTC TGGTGAGATT GAGATTTTAG GGCTTAAATT GCCACGAGAT GCCGAAAAGC TACGCCTTAA AATTGGCTAT ATGACGCAAA AATTCTCTTT GTATGATGAC TTAACCGTGA AAGAGAACCT TAAGTTTATT GCCAAAATTT ACGGCTTATC TCGAGCAGAG CAAGCTGCGC GGATCAAAGA GTTATTAGAT ACCTACGGTT TAGACCAAAA GGCCGATCAG CTTGCCGGTA GCATGAGTGG TGGCCAGAAA CAGCGCCTAG GGTTAGCGGC GGCCACCATG CATAAACCTG AGCTACTGTT CCTTGATGAG CCAACTTCGG CTGTGGATCC AGAGAATCGT CGTGACTTTT GGGAGAAGCT ATTCGACTTG TGTGAACAAG GCACCACGAT TTTAGTTTCG ACCCACTATA TGGATGAAGC CGAGCGTTGC CATAAACTTG CCATACTGGA GGCGGGGGTA AAGCGCGCCG ATGGCTCACC GGAGCAGCTG ATGCAGAATA TGGGCGCGCA AGTAGTAGAA GTCGAATCGA CAAACTTAAG ACGACTAAAG CAAGAGTTAT TGGCTCTTCC CGAAGTCATC AGTGCCGCTC AACTTGGCTC CAGACTGAGA GTCTTGGTCA AAACCAGTTG TAGTGATCCG GTGCGTTTTT TAAGTGAAAA ACAATCCTTG GGCTTGGATA CGCTAACACT GGTGCGACCT AGCCTAGAAG ATGTATTCGT CACTTGTACG GGGAAGGGGC GCCAATGA
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Protein sequence | MSQSVIKSSQ SASLNDRPVI KSGQSASKSN NPVIKTKGLC RHFGSLKAID DLDFEVEKGQ IYGFLGPNGC GKTTAIRMLT GLLLPTSGEI EILGLKLPRD AEKLRLKIGY MTQKFSLYDD LTVKENLKFI AKIYGLSRAE QAARIKELLD TYGLDQKADQ LAGSMSGGQK QRLGLAAATM HKPELLFLDE PTSAVDPENR RDFWEKLFDL CEQGTTILVS THYMDEAERC HKLAILEAGV KRADGSPEQL MQNMGAQVVE VESTNLRRLK QELLALPEVI SAAQLGSRLR VLVKTSCSDP VRFLSEKQSL GLDTLTLVRP SLEDVFVTCT GKGRQ
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