Gene Spea_4202 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSpea_4202 
Symbol 
ID5664586 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella pealeana ATCC 700345 
KingdomBacteria 
Replicon accessionNC_009901 
Strand
Start bp5098178 
End bp5099185 
Gene Length1008 bp 
Protein Length335 aa 
Translation table11 
GC content48% 
IMG OID641238866 
ProductABC transporter related 
Protein accessionYP_001504047 
Protein GI157964013 
COG category[V] Defense mechanisms 
COG ID[COG1131] ABC-type multidrug transport system, ATPase component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value0.933672 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGCCAGT CGGTCATCAA AAGTAGCCAG TCGGCCAGCC TGAATGATCG TCCGGTCATC 
AAAAGCGGTC AGTCAGCAAG CAAGAGTAAT AATCCGGTCA TCAAAACCAA AGGTCTATGT
CGTCATTTTG GTAGCTTAAA GGCAATCGAT GACCTCGATT TTGAGGTCGA AAAAGGCCAA
ATCTATGGTT TTCTCGGCCC TAATGGCTGC GGCAAGACCA CGGCTATTCG TATGCTCACC
GGTCTACTGT TGCCAACCTC TGGTGAGATT GAGATTTTAG GGCTTAAATT GCCACGAGAT
GCCGAAAAGC TACGCCTTAA AATTGGCTAT ATGACGCAAA AATTCTCTTT GTATGATGAC
TTAACCGTGA AAGAGAACCT TAAGTTTATT GCCAAAATTT ACGGCTTATC TCGAGCAGAG
CAAGCTGCGC GGATCAAAGA GTTATTAGAT ACCTACGGTT TAGACCAAAA GGCCGATCAG
CTTGCCGGTA GCATGAGTGG TGGCCAGAAA CAGCGCCTAG GGTTAGCGGC GGCCACCATG
CATAAACCTG AGCTACTGTT CCTTGATGAG CCAACTTCGG CTGTGGATCC AGAGAATCGT
CGTGACTTTT GGGAGAAGCT ATTCGACTTG TGTGAACAAG GCACCACGAT TTTAGTTTCG
ACCCACTATA TGGATGAAGC CGAGCGTTGC CATAAACTTG CCATACTGGA GGCGGGGGTA
AAGCGCGCCG ATGGCTCACC GGAGCAGCTG ATGCAGAATA TGGGCGCGCA AGTAGTAGAA
GTCGAATCGA CAAACTTAAG ACGACTAAAG CAAGAGTTAT TGGCTCTTCC CGAAGTCATC
AGTGCCGCTC AACTTGGCTC CAGACTGAGA GTCTTGGTCA AAACCAGTTG TAGTGATCCG
GTGCGTTTTT TAAGTGAAAA ACAATCCTTG GGCTTGGATA CGCTAACACT GGTGCGACCT
AGCCTAGAAG ATGTATTCGT CACTTGTACG GGGAAGGGGC GCCAATGA
 
Protein sequence
MSQSVIKSSQ SASLNDRPVI KSGQSASKSN NPVIKTKGLC RHFGSLKAID DLDFEVEKGQ 
IYGFLGPNGC GKTTAIRMLT GLLLPTSGEI EILGLKLPRD AEKLRLKIGY MTQKFSLYDD
LTVKENLKFI AKIYGLSRAE QAARIKELLD TYGLDQKADQ LAGSMSGGQK QRLGLAAATM
HKPELLFLDE PTSAVDPENR RDFWEKLFDL CEQGTTILVS THYMDEAERC HKLAILEAGV
KRADGSPEQL MQNMGAQVVE VESTNLRRLK QELLALPEVI SAAQLGSRLR VLVKTSCSDP
VRFLSEKQSL GLDTLTLVRP SLEDVFVTCT GKGRQ