Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Spea_4201 |
Symbol | |
ID | 5664585 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella pealeana ATCC 700345 |
Kingdom | Bacteria |
Replicon accession | NC_009901 |
Strand | - |
Start bp | 5097036 |
End bp | 5098181 |
Gene Length | 1146 bp |
Protein Length | 381 aa |
Translation table | 11 |
GC content | 50% |
IMG OID | 641238865 |
Product | ABC-2 type transporter |
Protein accession | YP_001504046 |
Protein GI | 157964012 |
COG category | [V] Defense mechanisms |
COG ID | [COG0842] ABC-type multidrug transport system, permease component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAATCCC TTTATCGATT ACAGGCGATA GTCGTCAAGG AGCTGACTCA GCTTAAGCGT GACAGAATGA CCTTTGGCAT GGTGATTATG ATCCCGCTTA TTCAGCTGAT GCTATTTGGC TTTGCCATTA ATACCAATAT TCGCGATATC CCCGTTGGCG TGGTGGATCA GAGCCAGACC GCCTTGAGTC GGGTGTTAGT TCAGACCATA ACAGCGACCC AAGTAGTGGA GTTTACCGAG CATTTCTATG ACATCGAGGC GGCTCATGCC GCCATCGCCC GTGGTGAAGT GCGAGCGGTA TTAGTGATCC CACAAGATGT TAGCCAGCGT CTAGTGCGTC ATAAAACCGT GGGGTTAGGT ACGCCACCGT CTAGCGATGA AGAAACCAGC CGCCCAGTAG CGCAGTGGAT TGTGGATGGC TCAGATACCA TGGTGGCTGC GGCAATCAAA GGCTTGCGCG CCATGCCGCT AACAGAGTTA CTTGGCATGC CAGCAAACCG CATGACACCG ACCTTTGAGG TGGCGCTATT TTATAACCCA GAGCAGCGCA CTGCGGTAAA TATTGTACCT GGGCTGGTGG GCGTGATCCT CACTATGACC ATGATCATGT TTACCTCGGC AGCCATAGTG CGCGAGCGAG AACGTGGCAA CTTAGAGATG CTGATCACCA CCCCAATCCG TTCCATAGAG CTGATGCTGG GCAAAATCAT CCCCTATATG TTTATCGGGA TCCTACAGGT AATCATCATT CTTGGCTTGG GATATAGCGT TTTCAATGTG CCGATAAACG GTAGCCTATT GCAGTTAGCT GGGGCGACTC TACTGTTTAT TATGGCGAGT TTAACCTTAG GTTTAGTTAT CTCGACCATA GCCAAAAGCC AGCTGCAATC GATGCAGATG ACCATTTTTG TGCTGCTACC GTCGATTTTG CTATCGGGCT TTATGTTCCC CTACGAGGGC ATGCCGATAG AGGCGCAGTA TATTGCTGAG GCGTTACCCG CGACTCACTT TATGCGCTTG ATCCGTGGCG TAGTGCTGCG TGATGTTGAA ATTATCGATA TGACTTACGA TGTGACTTGG TTGGCGATAT TTACTGTCAT TGGCTTAATT GTGGCGTCGA TGCGCTTTAA AAAGAATCTC GGTTAA
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Protein sequence | MKSLYRLQAI VVKELTQLKR DRMTFGMVIM IPLIQLMLFG FAINTNIRDI PVGVVDQSQT ALSRVLVQTI TATQVVEFTE HFYDIEAAHA AIARGEVRAV LVIPQDVSQR LVRHKTVGLG TPPSSDEETS RPVAQWIVDG SDTMVAAAIK GLRAMPLTEL LGMPANRMTP TFEVALFYNP EQRTAVNIVP GLVGVILTMT MIMFTSAAIV RERERGNLEM LITTPIRSIE LMLGKIIPYM FIGILQVIII LGLGYSVFNV PINGSLLQLA GATLLFIMAS LTLGLVISTI AKSQLQSMQM TIFVLLPSIL LSGFMFPYEG MPIEAQYIAE ALPATHFMRL IRGVVLRDVE IIDMTYDVTW LAIFTVIGLI VASMRFKKNL G
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