Gene Spea_4187 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSpea_4187 
Symbol 
ID5664571 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella pealeana ATCC 700345 
KingdomBacteria 
Replicon accessionNC_009901 
Strand
Start bp5082393 
End bp5083697 
Gene Length1305 bp 
Protein Length434 aa 
Translation table11 
GC content48% 
IMG OID641238851 
Producthypothetical protein 
Protein accessionYP_001504032 
Protein GI157963998 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAACAGAG CGTTTATCAC CTCTGGAGCG TGGCTAAAGG GCAGCGTACG TCTGTGGTTG 
TTTGATTTAG GTTGTGTCAG TTTTCTCGGG GTGGGCTTGT TAGGGCTAAT TATGGCCTTA
GGCCTGCCTT TTTTGTTGGC CGATGACGCC GAGCGAGAAG TCGATACCCT GATCTTGCTG
ATGAACATGT TTGTCGCCTC CACTTGCATT GCTATTGCGT GGCAGATGAA TCGTCTGGCA
GCGACAGAGT GGGCAACGTT AGTCCCTCAG TATCGGCTGA GTGTGTTTTT GCAGTCCCTG
GGCTTATTGT TGAGCAGCAT CATGATCGCG ACAGGTTTTT TGTTGGCCCA TGATGCGATA
GATAAGGCTG ATGAGGTGCT GCTGACTTTG CTATTTAGCT TTAGTTTTAT CTATCTGAGC
TTGATAAGCA GTCACGCTTT TTATCTATCA TTTTTACTCT ATGTTTCGCT ACCTATGCAG
CCTGTTTTAG TTGGTTTTTT ACCTCAAGGT GGCAGTTTTA TATTGCTGTT TACCGTCTTA
GTGTTAGCGG TGTTCCTGTG GCAAAAACTG TCGCAGTTAA CGTGGAACAG TAGGGCGCGC
AGTGTTTATT TAAATGGACT CGAGGTGGGC TGGCTCTGGC TACCGTCACC ACAATCATTT
AAGTTATTAA ACCGGCTCGA ACGCAGCCTG CATCCGGCAA ATTACTTTAT TGGCCCTGTG
TTTAGCGTCA TGCTATTGGC GATGCCGTTG ATCACCTTAG TGCTAGCCGT GATTGCCTAT
TATATGGCTG TGCAGTTACC TGTGTTGGTG CTGCTGGTGC AGTTTAATTG TATCTTATGT
GGCATGTTGC ACTGGAGCCG TATTCAGCGT TGGCGCGCAG TAGAAAGCCT GTTCATTCTT
CCAGGGTTTG ATGGCAAGCA GGGCATGATT AATGCCTTTA TGAAGGCGCA ATATCGGCTG
TTATTCATAT TGGTGGCCAG TATGGTGATC ACCGCAAGCT TAGTGAGTCT GTTGAATCCC
GTTATCAATG CCTCTATCTG GCTACATATC GTATTAACCA CACTGTTTGG TTGTAGCTTG
AGCTTAGGAC TTGGCTCTAT GTGCCGAAGT TCGTTGCAGA TCTCGGGTTT AATCTTCTTG
GTTGGTTTGC TGTCGGGCTG GGTGTCGGTT GGGTTAGCGG ATATTGAACG CGGTGAGCAA
GTGTGGGGTT TAGTTCACTG GGATCTCGCC TTCGTTGTTT TCTCTCTATT TACATTATGG
TTTGCTAAGC GGCGCTTATG GCGAGGCGAT CTGCTGCGGT CATAG
 
Protein sequence
MNRAFITSGA WLKGSVRLWL FDLGCVSFLG VGLLGLIMAL GLPFLLADDA EREVDTLILL 
MNMFVASTCI AIAWQMNRLA ATEWATLVPQ YRLSVFLQSL GLLLSSIMIA TGFLLAHDAI
DKADEVLLTL LFSFSFIYLS LISSHAFYLS FLLYVSLPMQ PVLVGFLPQG GSFILLFTVL
VLAVFLWQKL SQLTWNSRAR SVYLNGLEVG WLWLPSPQSF KLLNRLERSL HPANYFIGPV
FSVMLLAMPL ITLVLAVIAY YMAVQLPVLV LLVQFNCILC GMLHWSRIQR WRAVESLFIL
PGFDGKQGMI NAFMKAQYRL LFILVASMVI TASLVSLLNP VINASIWLHI VLTTLFGCSL
SLGLGSMCRS SLQISGLIFL VGLLSGWVSV GLADIERGEQ VWGLVHWDLA FVVFSLFTLW
FAKRRLWRGD LLRS