| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Spea_4124 |
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| Symbol | |
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| ID | 5664508 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella pealeana ATCC 700345 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009901 |
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| Strand | - |
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| Start bp | 5007771 |
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| End bp | 5009228 |
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| Gene Length | 1458 bp |
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| Protein Length | 485 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 641238788 |
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| Product | diguanylate cyclase |
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| Protein accession | YP_001503969 |
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| Protein GI | 157963935 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG2199] FOG: GGDEF domain |
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| TIGRFAM ID | [TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 26 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGGCAATA GAGTTTGGAA TGATAAAAAG CGCTTTATAT GGATTCTATC TCTATTGCTG
CTAGTGGCTT TTGCGGTGAC TAGCGGGATC AGTTATCAAG TTGCCCATGA CTCATTAAGT
ACACAGATTA AAGAGAATAC TCTGCCGCTC ACTAGCGATA ATATTTACTC CGAAATTCAG
CAAGACCTGC TTAGACCGAT TTTTATCTCC TCGTTAATGG CTCAGGATAC GTTTGTCAGA
GACTGGACCA TTAACCGTGA GCAGACGCCA GATAAACTTA TCCGTTATCT CAAAGAGATC
CAGGATAAGT ACGCTACAGT CACCAGCTTT TTTGTCTCCG AAGCTTCACG CAAATATTAC
CACTCTAGCG GTGTATTAAA GCAGATAGAA GATATCGAAC CGGAGGATGC CTGGTACTTT
CGAGTGCGTT CTTTACCTAA GCATGAGCAT TATGAAGTGA ATATCGACCC CGATACGGCG
GATAAAAACC GGACAGTGAT CTATGTTAAC TACAAGGTAT TTGATTTTGA TGGTAATTTC
ATAGGCGTGA CCGGGGTTGG TCTAGCGGTT GAAAGCGTTA AACGCCTGAT TGAGTTATAT
CAGGCTCGCT ATAACCGCAG CGTCTATTTT ACCGATAGGC AAGGTAACGT CACCTTGCAC
AGTGAACAAT ACAATGGTGC GGCTAGCCTG CAAACGAGCT CTGGCTTGGA ATCTCTCGCC
ACTCGAATTC TCACCAGTCC TAGTGCCTCA TTTTCGTATC AGAAAGCGGG AGAGACGGTC
TATTTAAACA GCCGCCTAGT ATCGGAGTTC AAGTGGCATC TGATTGTTGA GCAACAGGAA
GATCGAGGCG AGCAAAAGCT ATTGACGACC TTCTGGGTCA ACATAGGTTT AAGCCTATTA
ATTACTATCG CTATTTTACT TATCGCCAAT ATGACCTTAG GTAAGTATCA GCGAAAATTA
GAGAGGATGG CCTCGACCGA TAAGCTTACA GGTGCGGCTA ATCGCCAAGC ATTCGAAGAC
TACTTCGCTA AATCCTTAGC TAATTCGATA TTAGAAAGCT CGCCAATGTC AGTGCTGCTG
CTCGATATTG ACCATTTTAA GAGGGTCAAT GATTGCCACG GCCATAATAT TGGTGACTTA
GTGATCCAAA CCTTAAGCCA TCTCCTGAAA GGCCAGCTAA GGAATGATGA TCTTCTGTGT
CGTTGGGGCG GCGAGGAGTT TTTGATCTTG CTACCCGGTT GTAGCTTAAG CCAAGGTAGT
GATATTGCCG AAAAGATTAG AAAGTTAGTG GAGGCCCGAC TGGTCACCAT AAATGGTTGT
GAAATCAATA TCACCATAAG CTGTGGCGTG GCAGAGTGCA GAACATCTGA AAAGGCTGAA
GAGCTGATTA ATCGTGTCGA TATCGCACTC TACCAAGCAA AAGAGCAGGG ACGTAATCGA
GTGGTCATGT CTTATTAG
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| Protein sequence | MGNRVWNDKK RFIWILSLLL LVAFAVTSGI SYQVAHDSLS TQIKENTLPL TSDNIYSEIQ
QDLLRPIFIS SLMAQDTFVR DWTINREQTP DKLIRYLKEI QDKYATVTSF FVSEASRKYY
HSSGVLKQIE DIEPEDAWYF RVRSLPKHEH YEVNIDPDTA DKNRTVIYVN YKVFDFDGNF
IGVTGVGLAV ESVKRLIELY QARYNRSVYF TDRQGNVTLH SEQYNGAASL QTSSGLESLA
TRILTSPSAS FSYQKAGETV YLNSRLVSEF KWHLIVEQQE DRGEQKLLTT FWVNIGLSLL
ITIAILLIAN MTLGKYQRKL ERMASTDKLT GAANRQAFED YFAKSLANSI LESSPMSVLL
LDIDHFKRVN DCHGHNIGDL VIQTLSHLLK GQLRNDDLLC RWGGEEFLIL LPGCSLSQGS
DIAEKIRKLV EARLVTINGC EINITISCGV AECRTSEKAE ELINRVDIAL YQAKEQGRNR
VVMSY
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