Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Spea_4059 |
Symbol | |
ID | 5664443 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella pealeana ATCC 700345 |
Kingdom | Bacteria |
Replicon accession | NC_009901 |
Strand | + |
Start bp | 4933159 |
End bp | 4933716 |
Gene Length | 558 bp |
Protein Length | 185 aa |
Translation table | 11 |
GC content | 49% |
IMG OID | 641238723 |
Product | phosphodiesterase |
Protein accession | YP_001503904 |
Protein GI | 157963870 |
COG category | [R] General function prediction only |
COG ID | [COG0622] Predicted phosphoesterase |
TIGRFAM ID | [TIGR00040] phosphoesterase, MJ0936 family |
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Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 0.00143502 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAACTTT TTATTGCCTC CGATCTACAC GGCTCTGTTA TAGCCACTCA AGCCATGCTG ACTCGCTTTG AGCAGTCTGG GGCTCAATAC CTTATTCTGC TCGGAGACAT GCTTAATCAC GGCCCGCGTA ACGCCATCCC CGACGGCTAC AATCCCACGG CCTTAGCTGA AACGCTGAAC CAGTATGCCG ATAAGATTAT TGCCGTTCGC GGTAACTGCG ACAGCGAAGT AGACCAAATG CTACTGCAAT TTCCGATCAC CGCGAGCTTT GCTCAAGTAT TGATGCCACA AATGCGTTTA TTCCTCACCC ACGGCCATAT TTATAATCCC GATAACCTGC CACCGCTACA AGCTGGTGAT GCACTAGTCT ATGGTCATAC CCACATTGCA GTGGCTGAAT ATCGTGACGA TATTTTATTG TTCAACCCGG GTTCAACCAC CATTCCACGT AATGGTGCTC GAGCTTCTTA CGGCTTAATC ACTGACACAG AATGTCAGGT ACGCGCCATA GACAACGATG AGCTACTACT CAGCTGTCCG ATACGTCATA CAAGATAG
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Protein sequence | MKLFIASDLH GSVIATQAML TRFEQSGAQY LILLGDMLNH GPRNAIPDGY NPTALAETLN QYADKIIAVR GNCDSEVDQM LLQFPITASF AQVLMPQMRL FLTHGHIYNP DNLPPLQAGD ALVYGHTHIA VAEYRDDILL FNPGSTTIPR NGARASYGLI TDTECQVRAI DNDELLLSCP IRHTR
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