| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Spea_4043 |
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| Symbol | |
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| ID | 5664427 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella pealeana ATCC 700345 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009901 |
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| Strand | + |
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| Start bp | 4909938 |
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| End bp | 4911296 |
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| Gene Length | 1359 bp |
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| Protein Length | 452 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 641238707 |
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| Product | general substrate transporter |
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| Protein accession | YP_001503888 |
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| Protein GI | 157963854 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2271] Sugar phosphate permease |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAACCAA GAACAAACTT CGATGATATG GAGTTCACTC CATTACACAG AAAAATAATG
TTGTGGGGAA GTGGAGGTCC TTTTCTAGAT GGCTATGTTT TGGTGATCAT CGGCCTAGCA
TTACAACAGC TCACTCCAGC ACTCGAACTT GATGCTCAAT GGATAGGTTT AGTCGGTGCG
GCCACACTCG CAGGCCTGTT TATTGGTACT GCCTTATTTG GTTATGTTGC TGATATTTTC
GGTCGAAAAT TGATGTTTAT GATAGATATT ATTGCTATCG CAGTGCTCTC TTTTGCAACC
ATGTTCATCT CCTCACCCAT TGAGCTTGTC GTTATGCGTT TTTTAATCGG TATTGTAATC
GGAGCCGATT ATCCTATTGC TACATCTATG GTGGCGGAGT TCTCCCCCAC TAAGAAACGT
GCTTACACAA TGGGCTTTAT TGCCGCAATG TGGTACGTCG GAGCGACTGC AGCAAACATG
GTTGGTTACC TACTATATGA TGTAGAAGAT GGTTGGCGCT GGATGTTCGG AAGTGCATTA
ATCCCATGTC TTATCATTCT ACTTGGTCGC TTCCACCTTC CAGAGTCGCC ACGATGGTTA
CTCAAGAAAG GTCGAGTAAA AGAGTGCAAA GAGACCATGG AAAAGTTCTT TGGGCCCGAT
GTAGAGATTA GTAATGAATC GGCAGAACAA ACAAAATACA GCAAGCTATT CGAACCTGTT
TATTTAAAAA GGATACTCTT CATCGGTATT ATCTGGACTT GCCAGGTGAT CCCTATGTTT
GCCATTTACA CCTTTGGGCC ACAAATCATT GAGTTACTGG GGTTTACTGA CGGAAAAGAT
GCCGCGTTAG GTAATATTGT CATCAGTTTG TTCTTTATGG CGGGATGTAT TCCGGCTATG
TACTGGCTCA ATTCAATTGG CCGACGGCCA CTACTAATAG GCAGCTTCGG CATAATGACT
GCTTCATTAG CACTATTAGG TGTGGTGCCC GATCCAAGCA TCTGGTTAAT TATTGGCGCA
TTTGCCACGT ACGCTTTCTT CTCTGGTGGA CCCGGGATCT TACAATGGCT CTATCCCAAT
GAACTGTTCC CAACAGAGAT CCGCGCATCG GCCGTTGGTG CTGTTATGTC ACTTAGCCGT
ATCGGTACCA TAGTCTCAAC CTATGCTTTG CCTATTTTTA TGACAACATA TGGTATCTCT
CCCACCCTAT TAGTTGGTGC TGCAATCTCG TTATTTGGAT TAATCATCTC TGTCTTTATG
GCGCCAGAAA CTAAAGGATT AACATTAGAA ACCACAAGTT CAGCGGAATT TGAAAGTAAA
GGTGCCGTAG TAGCATCTAA TACATGCAAG ACTATTTAA
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| Protein sequence | MKPRTNFDDM EFTPLHRKIM LWGSGGPFLD GYVLVIIGLA LQQLTPALEL DAQWIGLVGA
ATLAGLFIGT ALFGYVADIF GRKLMFMIDI IAIAVLSFAT MFISSPIELV VMRFLIGIVI
GADYPIATSM VAEFSPTKKR AYTMGFIAAM WYVGATAANM VGYLLYDVED GWRWMFGSAL
IPCLIILLGR FHLPESPRWL LKKGRVKECK ETMEKFFGPD VEISNESAEQ TKYSKLFEPV
YLKRILFIGI IWTCQVIPMF AIYTFGPQII ELLGFTDGKD AALGNIVISL FFMAGCIPAM
YWLNSIGRRP LLIGSFGIMT ASLALLGVVP DPSIWLIIGA FATYAFFSGG PGILQWLYPN
ELFPTEIRAS AVGAVMSLSR IGTIVSTYAL PIFMTTYGIS PTLLVGAAIS LFGLIISVFM
APETKGLTLE TTSSAEFESK GAVVASNTCK TI
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