| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Spea_4008 |
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| Symbol | |
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| ID | 5664392 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella pealeana ATCC 700345 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009901 |
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| Strand | - |
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| Start bp | 4868294 |
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| End bp | 4869340 |
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| Gene Length | 1047 bp |
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| Protein Length | 348 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 641238672 |
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| Product | polysaccharide deacetylase |
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| Protein accession | YP_001503853 |
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| Protein GI | 157963819 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG0726] Predicted xylanase/chitin deacetylase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGTTAAAA ACGTGTTGCT AGCGCTACTT GCGCTGACAG GTTTTTCGGC TCACGCGACG
GTGATCCTAC AGTATCATCA TGTTTCGGAT AGTACGCCAG CGATCACCAG TGTTACTCCT
GCGCAATTTA AAGAGCAGAT GCAGTATCTG GCGGAAAACA ACTTCAACGT CGTGCCACTT
TCAACTGTGG TGGAGTCAAT TAAGGCTAAG AAAGCACTGC CAGCAAAAAC GATTGCGATC
ACCTTCGATG ATGGTTACCG CAGCATTGCT AATACAGCGC ACCCCATTTT AAAGCAATAT
AAATTCCCCT ACACCCTTTT TGTCTCGGTT GAACCGATCC TAAAAGAGTA TGGCGAAATG
ATGAGCTGGC AGCAGCTGAT CACGCTATCT AACGAGGGAG CGGAAATTGC CAACCATAGT
TGGGGGCATG AACACCTTAT TCGTAAAGAG GCGGGCGAAA CGGATAAGCA ATGGCTAGCA
CGTATCGAGA GCAATATTTT GCGCACTGAA GCCGAGATTG CTAAGGCGAC AGGGCAAAAC
TTGAAAATGC TGGCTTACCC ATACGGTGAA TACAATCGGC AGATTGAAGA TATGCTCGAC
AAGCACGGCT TTGTGGCGTT TGGTCAGCAA TCTGGAGCGG CAGGTCCATA CTCGCCATTA
ACCGCGTTAC CTCGCTTTCC TGTAGCAGGT GTTTATGCCG ACCTCAACAG CCTAAAGGTA
AAGCTGCATA GTTTGAATAT GCCTGTGCTG GCTCAAACGA ATAGCAACCC TGAGTTGGCT
CAAGGCCAAT GGCGACCAGA GATTAAGGTG ACCCTAGATA TGAGTGATAT CAATGCGTCA
CAGCTGATGT GCTTTATTCA GGGACAAGGT GCTAAGAAGC CAAGTTGGAT CTCTGATAAT
GAGTTTAGTA TTCAGGCCGA GCTTGATTTG CCTGCGGGGC GCTCACGTTA TAACTGTACC
GCGCCAAGTA AGAGTAAAGG TAGTTACTAC TGGTTCTCAC AGCCTTGGAT TAGGCCTAAG
TCAAACGGTC AGTGGATTGC TGAATAG
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| Protein sequence | MVKNVLLALL ALTGFSAHAT VILQYHHVSD STPAITSVTP AQFKEQMQYL AENNFNVVPL
STVVESIKAK KALPAKTIAI TFDDGYRSIA NTAHPILKQY KFPYTLFVSV EPILKEYGEM
MSWQQLITLS NEGAEIANHS WGHEHLIRKE AGETDKQWLA RIESNILRTE AEIAKATGQN
LKMLAYPYGE YNRQIEDMLD KHGFVAFGQQ SGAAGPYSPL TALPRFPVAG VYADLNSLKV
KLHSLNMPVL AQTNSNPELA QGQWRPEIKV TLDMSDINAS QLMCFIQGQG AKKPSWISDN
EFSIQAELDL PAGRSRYNCT APSKSKGSYY WFSQPWIRPK SNGQWIAE
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