| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Spea_3999 |
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| Symbol | |
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| ID | 5664383 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella pealeana ATCC 700345 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009901 |
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| Strand | + |
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| Start bp | 4859111 |
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| End bp | 4860685 |
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| Gene Length | 1575 bp |
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| Protein Length | 524 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 641238663 |
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| Product | cytochrome c oxidase subunit II |
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| Protein accession | YP_001503844 |
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| Protein GI | 157963810 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG1622] Heme/copper-type cytochrome/quinol oxidases, subunit 2
[COG2010] Cytochrome c, mono- and diheme variants |
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| TIGRFAM ID | [TIGR02866] cytochrome c oxidase, subunit II |
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Plasmid Coverage information |
| Num covering plasmid clones | 27 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGAAGCAAT TGTTGTATAG TGTACTGGCG TTGCTATTTA CGCCCGTGCT TGTTGCATCA
GAAATGCCAC TCAATATGAC AGAGGGTGTG ACGGATATCA GTAACAGGGT TTATAACCTG
CACATGATTA TTCTCTACAT CTGCTGCGCT ATTGGCATCT TAGTATTTGG CGTAATGATT
TATGCCATGA TCAACCACCG CAAATCAAAA GGCGCAGTTG CCGCCAACTT TCATGAAAGT
ACTAAAGTCG AGATCCTGTG GACTATTGTA CCTTTTATCA TCTTGATACT TATGGCCATT
CCCGCAACCA AAACATTGAT TGCCATGGAA GACCCCAGTA ATGCCGACCT AACGGTCAAG
ATCACTGGCT CACAGTGGAA ATGGCATTAC AGTTATTTCG ATCAAGACAT TGAGTTCTTC
AGCCTATTAT CGACACCGCG TGAACAGATA GATGGCGATG CAACCAAAGG CGAAAACTAC
CTGTTAGAGG TAGATAAGCC CTTGGTTTTA CCTATCAATC GCAAGGTACG TTTCTTAATG
ACCTCAGAAG ATGTTATCCA CTCCTGGTGG GTGCCCGCTT TTGCTGTGAA AAAAGATGCC
AATCCGGGAT TTATTAATGA GGCGTGGACC CGCATCGACA AGCCCGGCAC ATACCGAGGT
CAATGCGCAG AGCTCTGCGG TAAAGACCAC GGCTTTATGC CGATTGTAGT GGAAGCACTA
TCGGAAGAGG ATTTCGATGC CTGGCTAATC ACTCAGCAAC AACACGCGCA AAATGCTGAA
GCGGCAGCTA AGACTGCTTT ATCGCAAACC TTGACCATGG AAGAGTTAAT GGCTCAAGGT
GAGCAAGTCT ACCTAGCAAG GTGTGCAGCT TGTCACCAAC CTAACGGGGC AGGCCTTCCA
GGTGTATTCC CATCCCTTAT TGGCAGCCCG ATAATTAAAG GAGCGGTAGC CAGCCATGTA
GATATTGTTG TAAACGGTAA ACCCGGCACC GCAATGCAAG CGTTTGCAAA ACAGCTAACG
GCCACAGAAA TCGCTGCCGT GGTGACCTTC GAGCGGAATG CTTGGGGTAA TGATTCTGGC
GATATGATCC AAGCTTCGGA TATCGACTCG GGGAGTTCAA CGCCTGCGGC ATCTGATGAC
TCAGACACAG CAATTGCCAC CACATTACCG GCAACGTTAC CTGAAACCCA GCAAGCAGAC
ATACCGGCAA CCGAGACTGT CGTAGAAGTG ACTGAAGATG TTAAAGCCGT TGTTTTAGAT
GACTTAACTA TGGATGAATT GATGACCATG GGTGAGAAGG TCTATATGAC TAGCTGTATT
GCTTGTCACC AAGCCACTGG CGCTGGCTTA CCACCAGCTT TCCCGTCATT GGTTGCGAGC
CCGATTATCA AAGGACCTGT TTCAGACCAC CTTGAGATGG TCATTAATGG TAAGCCTGGC
ACGGCGATGC AAGCGTTTGG TCAACAGCTC ACTCCTCAAG AAATTGCCGC GGTCATTACT
TTTGAACGCA ACGCATGGGG TAATGACTCA GGAGATGCTG TGCAAGCTTC TGATGTTGAT
GGTCACGGAA AGTAG
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| Protein sequence | MKQLLYSVLA LLFTPVLVAS EMPLNMTEGV TDISNRVYNL HMIILYICCA IGILVFGVMI
YAMINHRKSK GAVAANFHES TKVEILWTIV PFIILILMAI PATKTLIAME DPSNADLTVK
ITGSQWKWHY SYFDQDIEFF SLLSTPREQI DGDATKGENY LLEVDKPLVL PINRKVRFLM
TSEDVIHSWW VPAFAVKKDA NPGFINEAWT RIDKPGTYRG QCAELCGKDH GFMPIVVEAL
SEEDFDAWLI TQQQHAQNAE AAAKTALSQT LTMEELMAQG EQVYLARCAA CHQPNGAGLP
GVFPSLIGSP IIKGAVASHV DIVVNGKPGT AMQAFAKQLT ATEIAAVVTF ERNAWGNDSG
DMIQASDIDS GSSTPAASDD SDTAIATTLP ATLPETQQAD IPATETVVEV TEDVKAVVLD
DLTMDELMTM GEKVYMTSCI ACHQATGAGL PPAFPSLVAS PIIKGPVSDH LEMVINGKPG
TAMQAFGQQL TPQEIAAVIT FERNAWGNDS GDAVQASDVD GHGK
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