| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Spea_3974 |
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| Symbol | |
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| ID | 5664358 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella pealeana ATCC 700345 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009901 |
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| Strand | + |
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| Start bp | 4828495 |
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| End bp | 4829949 |
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| Gene Length | 1455 bp |
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| Protein Length | 484 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | 641238638 |
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| Product | O-succinylbenzoate-CoA ligase |
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| Protein accession | YP_001503819 |
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| Protein GI | 157963785 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG0318] Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II |
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| TIGRFAM ID | [TIGR01923] O-succinylbenzoate-CoA ligase |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCAAGCTC AGGCAATATC ACCAATACAT CAAGTTGCTC AGCGTAATAG CGCTGCACAG
GCTTACCGGT TTATGGGGCA AAGCGTTAGC TACGGCTCAC TTAGCCAAGG TGTTATTTCG
TTAGCCGAGC AGCTATCAGC CATGGGCTTA AAACGCGGTG ACCGCTTAGC TTGTATCGGC
CATAACTGTC CGCAACTACT GCAGATCTAC TGGGCTTGTG TCGATAGCGG TGTACTCTTC
TGCCCCATCT CACCGCGTTT TACCAGCCAG CAAATTATCG AGCTGATGCA GACTCATAGT
TATCACCGCT ATTGGCTCGC AGCTGACACC CCGGCGGACT CGACACTGAT TCAAGCCTTA
AATCATCAAA ACCAGTTTGA GTCAGTGACG CTAGATTTTA CTCGCCAAAG CCAGCGGTCA
GCGCCAGCCC TAGAGCCTCA CATCGCCGTT AACGCTATTC TCACCTCCGG CAGCAGCGGT
ACACCTAAAG CCGCCGCCCA CAGCCTAGCG AATCATATCG CCAGCGCCAA AGGTTCGAGA
GAATTAATAA AGTTAGCAGC AGAAGATAGC TGGTTATTGT CGCTACCACT GTTTCATATC
GGTGGCCTCG CGATTTTAAA CCGCTGCGCC CTCGCAGGCG CCTGCGTGGT ATTTGAAGAC
AAGCGGCTAT CACTCGCCCA GCAGCTTGTT CGTGACAAGA TTAGCCACCT CTCCTTAGTG
AGCGCACAAC TGCAGCAGCT GCTTGCAAAT AGTGATAGCG AAAATGCCAA TAACGACTGC
TTAAACCAAG TCAAAGCCAT GCTACTCGGA GGCGGCGCGA TCTCAGGCGA CCTATTAGCA
GAATTAGCCA AGCGCGACAT AAAGGCCTAC ACCAGCTACG GCATGACAGA GATGGGATCG
CAGATCACCA CAGGCATTGC CCGCACCGAC GGATCCAGCG GCAAGCTGTT ATCGGGACGA
GAACTGAAGA TTATCGATGG TGAAATATGG CTAAAAGGCG AGTGTCTGTT TCTTGGATAT
TTAAGCGAGG ACGGTTTAAA TTTACCGCTC AATAAAGACG GCTGGTTCTA CACCAAAGAT
CTAGGCCACT TTGATGCAAA CGCCAATCTC TGCATCGACG GCCGCGCCGA TAACATGTTT
ATCAGCGGCG GCGAAAACAT CCAACCCGAA GAGATAGAAG CCGCTTTAAA GCTGCACCCG
TTAATCAGCG ATGCCATCGT GTTCCCTGTG GCAGATGCCA AGTTTGGTAA TCTCCCAGCA
GCCATTCTTA AGTTAAATGA GAGTAAGCTG AATAACAGTT CAGCTAACCA GCCTTTGGAA
GCCGAGCTAA CAGAGTTCCT CGCCGACAAG ATCGCCCGCT TCAAAAGGCC AAGGCAATAT
TACCCTTGGC CAGAGGTCAG CAGCGCCGGG ATTAAGGTTG TACGCAAACA GGTGATAGAG
GCAGTTAAGC GTTAG
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| Protein sequence | MQAQAISPIH QVAQRNSAAQ AYRFMGQSVS YGSLSQGVIS LAEQLSAMGL KRGDRLACIG
HNCPQLLQIY WACVDSGVLF CPISPRFTSQ QIIELMQTHS YHRYWLAADT PADSTLIQAL
NHQNQFESVT LDFTRQSQRS APALEPHIAV NAILTSGSSG TPKAAAHSLA NHIASAKGSR
ELIKLAAEDS WLLSLPLFHI GGLAILNRCA LAGACVVFED KRLSLAQQLV RDKISHLSLV
SAQLQQLLAN SDSENANNDC LNQVKAMLLG GGAISGDLLA ELAKRDIKAY TSYGMTEMGS
QITTGIARTD GSSGKLLSGR ELKIIDGEIW LKGECLFLGY LSEDGLNLPL NKDGWFYTKD
LGHFDANANL CIDGRADNMF ISGGENIQPE EIEAALKLHP LISDAIVFPV ADAKFGNLPA
AILKLNESKL NNSSANQPLE AELTEFLADK IARFKRPRQY YPWPEVSSAG IKVVRKQVIE
AVKR
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