| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Spea_3967 |
|---|
| Symbol | |
|---|
| ID | 5664351 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella pealeana ATCC 700345 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009901 |
|---|
| Strand | - |
|---|
| Start bp | 4820971 |
|---|
| End bp | 4821441 |
|---|
| Gene Length | 471 bp |
|---|
| Protein Length | 156 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 42% |
|---|
| IMG OID | 641238631 |
|---|
| Product | formate-dependent nitrite reductase |
|---|
| Protein accession | YP_001503812 |
|---|
| Protein GI | 157963778 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | [TIGR03146] cytochrome c nitrite reductase, pentaheme subunit |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 24 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTCCAGCT TATTTAAATA TTCAGTTTCC TTGTTGATGA GCATTTTACT TGTTGTTGCC
GCTTCGGTGA TATCTATCAA GGCTGTTGCC GCAGAATTTA AAATTAATGA AAATAAACAA
TGCATTATGT GCCATAAGCG CAATGGAAAA ATGCTCGGCG TACATGCCAA TGACGCCTTA
GATATCAGTT GTCAGGATTG TCATGGTGAA AAAGAGGGAC ATCCAAGAAA GGCATCCAAC
TTAATCGGCT TTAGTAATAA GTCGGCCTCA GATGTTAATA CGCAAACTCA AAGCTGTTTG
AAGTGTCACG ACCATAGCGT ATTAGCTGAA CGTGATTGGA GCCATGACGC TCACTCTAAC
AAGGTGAATT GTGCTAGCTG CCATCTTTTA CATCCCAACA CAGATCCTGT GCTAGGCGTA
TCTGCAAAAG AGCGTAGTGA ACTGTGTAGC AGTTGCCACG TGGCCAAGTA A
|
|---|
| Protein sequence | MSSLFKYSVS LLMSILLVVA ASVISIKAVA AEFKINENKQ CIMCHKRNGK MLGVHANDAL
DISCQDCHGE KEGHPRKASN LIGFSNKSAS DVNTQTQSCL KCHDHSVLAE RDWSHDAHSN
KVNCASCHLL HPNTDPVLGV SAKERSELCS SCHVAK
|
|---|
| |