Gene Spea_3949 details

Gene Information

• Locus tag: Spea_3949
• ID: 5664333
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Shewanella pealeana ATCC 700345
• Kingdom: Bacteria
• Replicon accession: NC_009901
• Strand: +
• Start bp: 4802932
• End bp: 4803600
• Gene Length: 669 bp
• Protein Length: 222 aa
• Translation table: 11
• GC content: 45%
• IMG OID: 641238613
• Product: type IV pilus assembly PilZ
• Protein accession: YP_001503794
• Protein GI: 157963760

Plasmid Coverage information

• Num covering plasmid clones: 25
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGTCATCGG AAAAGGATTT CAATACATTA GATAACCTCA CCTGCAATAC AGAGGTGCAT 
CTACAACTGC TCACGCCGAC AAAAACCATA CGCCTACGCA GTCGCTTAAT TGGGGTGGAT 
CCGGGGCGAG CGGTGATCTT AGCTTATGGA AATGATAAGA GCTGGAGAGG CACGAGTGCA 
TTTATCACCG ACAGACAGAG CGTGGTGATA AGGGTCGTTA ACAGCGATGA GCAAGATGCC 
AGTATCTTAG CTTTTAGAAG TAATATTCAA CAAGTCATCT CCGCTGTGGG GCGCTGGATA 
ATTGTCCGTT ATCCAAAAGA GCTACAAACA CTTTCCCTGA GACAACATTC ACGAATTCCA 
ATCAATATCA AAGCCAGCCT AACTACTATA GACTCGAGTG AGGTCCTCTC GACTGGGTAT 
CTAAAGGATA TCTCAATTAA AGGGGGAGCC TTTGTCAGCG AGGCGAGTGG TAACTTTAAT 
GTCGATAATC AGTATCAACT TAAGATGGAC TTAGGTGGCG AGGAAGAGAG CATCTCTATC 
ACCATAAAAA ACCAACAAGA GTTAGACCCC TCTTCGAGAC TCGCTCAATA CGGGTTTACT 
CTCGACGCTA GTGTTGAAGA AAGTGAGACG TTAGTGCAAA AAGCCATCTT GCACTACCTA 
AACCAATAG 

 

Protein sequence

MSSEKDFNTL DNLTCNTEVH LQLLTPTKTI RLRSRLIGVD PGRAVILAYG NDKSWRGTSA 
FITDRQSVVI RVVNSDEQDA SILAFRSNIQ QVISAVGRWI IVRYPKELQT LSLRQHSRIP 
INIKASLTTI DSSEVLSTGY LKDISIKGGA FVSEASGNFN VDNQYQLKMD LGGEEESISI 
TIKNQQELDP SSRLAQYGFT LDASVEESET LVQKAILHYL NQ