Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Spea_3906 |
Symbol | |
ID | 5664290 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella pealeana ATCC 700345 |
Kingdom | Bacteria |
Replicon accession | NC_009901 |
Strand | - |
Start bp | 4752644 |
End bp | 4753081 |
Gene Length | 438 bp |
Protein Length | 145 aa |
Translation table | 11 |
GC content | 47% |
IMG OID | 641238570 |
Product | D-tyrosyl-tRNA(Tyr) deacylase |
Protein accession | YP_001503751 |
Protein GI | 157963717 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG1490] D-Tyr-tRNAtyr deacylase |
TIGRFAM ID | [TIGR00256] D-tyrosyl-tRNA(Tyr) deacylase |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.0328589 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGATAGCCC TTATTCAACG TGTGAGTGAA GCAAAAGTTG TCGTTGATGG CGCGACTATC GGTGAGATCG ATAAAGGTCT GTTGGTGTTA CTCGGTGTTG AGCGCGAGGA TAACATTGAA AAGATGCAAA AGTTGGCCAC TAAGGTGATG AGTTACCGTG TGTTTTCCGA TGAGAATGGC AAGATGAATC TTAACCTTGA GCAAGCGGGT GGCAGCTTAC TTGTGGTCTC GCAATTTACC TTGGCAGCCG ATACTGGCCG AGGCTTACGC CCAAGCTTTT CAGGCGCCGG CACACCAGAT CAAGCCCGTG AACTTTATGA AGCCTTTGTC GATTTTTGTA AATCAAAAGG GGTCAACACC CAAACCGGTC AATTTGCCGC AGATATGAAA GTGTCTTTAG TTAACGACGG CCCAGTGACT TTTAATTTGC AGGTTTAG
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Protein sequence | MIALIQRVSE AKVVVDGATI GEIDKGLLVL LGVEREDNIE KMQKLATKVM SYRVFSDENG KMNLNLEQAG GSLLVVSQFT LAADTGRGLR PSFSGAGTPD QARELYEAFV DFCKSKGVNT QTGQFAADMK VSLVNDGPVT FNLQV
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