Gene Spea_3881 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSpea_3881 
Symbol 
ID5664265 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella pealeana ATCC 700345 
KingdomBacteria 
Replicon accessionNC_009901 
Strand+ 
Start bp4726801 
End bp4727487 
Gene Length687 bp 
Protein Length228 aa 
Translation table11 
GC content50% 
IMG OID641238545 
ProducttRNA guanosine-2'-O-methyltransferase 
Protein accessionYP_001503726 
Protein GI157963692 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0566] rRNA methylases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.0312373 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGTCCTG AACGTTTCGC CCGCATCAAC CAAATGCTTG ATAACCGCCA ACCCGATCTC 
ACCGTATGCC TAGATACCGT GCACAAGGGT AATAACATTG CCGCCGTGCT ACGTACCGCT 
GATGCGGCGG GCATACATGA AGTCCATGCG GTTTGGTCCG AACTAGAAAT GCGCGTATCG 
GGCAACACGG CGTCAGGCAG CCAACAATGG GTTAAGACTC GCGTACACCA GAGTATGGCG 
CAAGCTGTAG AAGCGTTTCG CGATCAAGAC ATGCAGATTC TAGCAACGAC CTTTTCAGAT 
ACCGCTGTCG ATTTCAGAGC GATTGATTAC ACCAAACCTA CAGTGGTTAT TATGGGTAAC 
GAGCGTGATG GCGTCAGCCC TGAAGGCATA GCTGCTGCGG ATCAACACAT CATCATTCCA 
ATGATAGGCA TGGTTCAATC ACTGAACGTA TCCGTTGCTG CCGCACTGAT TATGTATGAA 
GCTCAACGTC AACGCACTGA GGCAGGCATG TATGGCACGC GAAAATTGGA TGACGCCTAT 
TGCCAGATTA AGCTATTTGA GGAAGGGCAC CCTATTTATG CTAAGGCTTG TCGCCGCAAG 
AAGCTGCCTT ATCCAGCCAT AGATGCAGAA GGCCAAATTG TAGCGGATGA AGACTGGTGG 
CAAAAAATGC GGGCTCCTTC TGAATAA
 
Protein sequence
MSPERFARIN QMLDNRQPDL TVCLDTVHKG NNIAAVLRTA DAAGIHEVHA VWSELEMRVS 
GNTASGSQQW VKTRVHQSMA QAVEAFRDQD MQILATTFSD TAVDFRAIDY TKPTVVIMGN 
ERDGVSPEGI AAADQHIIIP MIGMVQSLNV SVAAALIMYE AQRQRTEAGM YGTRKLDDAY 
CQIKLFEEGH PIYAKACRRK KLPYPAIDAE GQIVADEDWW QKMRAPSE