Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Spea_3868 |
Symbol | |
ID | 5664252 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella pealeana ATCC 700345 |
Kingdom | Bacteria |
Replicon accession | NC_009901 |
Strand | - |
Start bp | 4702004 |
End bp | 4703218 |
Gene Length | 1215 bp |
Protein Length | 404 aa |
Translation table | 11 |
GC content | 47% |
IMG OID | 641238532 |
Product | OmpA/MotB domain-containing protein |
Protein accession | YP_001503713 |
Protein GI | 157963679 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG2885] Outer membrane protein and related peptidoglycan-associated (lipo)proteins |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 0.599352 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAAACTT ATCCGTTTTG CTCGTCTTCA AGCGTTTTAA TTACAGCACT ACTTTGCCCT CTAGTGGTAC AAGCCGCGGA AAATGAGTCG CAACAAACCG AGCATATGTG GTCTCAGGGT TGGTATCTCG GTGGACAGTT TGGTTTAGCG ACAACCAATG TGTCTAACGC GGGATTAGAT GAGCTATATG AGCAAGCAGG GATCGATGCG AGTAGCACTA AAGTTGATGA TTCTGGAGCG AGTTATGGTC TATTTCTAGG TTATAAGTTC AATCAATATT TTAGTGTGGA AGCGGGATAC CTTGATTTGG GCGAGCGTAG CGTCGAATTT TCTGGGCAAA CAACCGATTT AGATGCTTAT TATGATTTAG CCGAGCATGT ATACCCTGAA ACCGGTGATG GCTGGTCCTT GAGTGTATTG GGGACCTATC CCCTCAGCGA ACGCTTCAGT GTTACAGGCA AGCTGGGTTA TTTTGCTTGG GAGTTAGATG CCGTCACCTC TTCGATTGCA GATGAGGCCA GTCAAGTAGG CTCAGACTCC CACTCTGGCT CTGGAGTTTG GTTGGGCGCC GAGCTAGGTT ATCAAATTAA TCATGATATG CAGGCCTATG TTAGCTATCA GCATATGCCA CTTGATGCCG ATGAAGTCGG GGTGTTTGCT TTAGGTCTTA GATACTGGTT TGGCTCTGAT TCTCGTGATG CCGCGCCAGT TTTACCTGCC GCAGTCGTGC CGACGCTTGC TAAAATTGGT AGTGATGGTG ATAGTGATAG TGATGGCGTG TTTAACGCGC AAGATCAGTG TCTAGATACG CCGAGCACTC ATGCGGTAGA TAGCCGAGGC TGCACTCTGT TTGCCCCGAG AGTGGTCGAG ATGAAGCTAA CAGTCTTGTA TGAGAATGAC AGCGATAAGA TCGACCTAAG CAACACAGAT AAAATCCAAA AGCTAGCCGA CTTTATCGAG CAATATGATA TTAAACAGAT CACAGTATTT GGTCATACAT CGGCTGTAGG GTCTCAAGCA TACAATCAAA AATTATCTGA GCGCCGCGCC GCATCTGTGG CTGAAATGCT AGCGGCAGAC TTTAATATCG CTACAGGTAT CATCAAAGCC GTGGGTAAGG GGGAGTCTGA ACCTATCAGC CATATCCCAG AACAAAATCG ACGCATTGAG GTTTATCTTA ACGAGGAACT CAATCTACCA GTGTTAAAGC AATGA
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Protein sequence | MKTYPFCSSS SVLITALLCP LVVQAAENES QQTEHMWSQG WYLGGQFGLA TTNVSNAGLD ELYEQAGIDA SSTKVDDSGA SYGLFLGYKF NQYFSVEAGY LDLGERSVEF SGQTTDLDAY YDLAEHVYPE TGDGWSLSVL GTYPLSERFS VTGKLGYFAW ELDAVTSSIA DEASQVGSDS HSGSGVWLGA ELGYQINHDM QAYVSYQHMP LDADEVGVFA LGLRYWFGSD SRDAAPVLPA AVVPTLAKIG SDGDSDSDGV FNAQDQCLDT PSTHAVDSRG CTLFAPRVVE MKLTVLYEND SDKIDLSNTD KIQKLADFIE QYDIKQITVF GHTSAVGSQA YNQKLSERRA ASVAEMLAAD FNIATGIIKA VGKGESEPIS HIPEQNRRIE VYLNEELNLP VLKQ
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