Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Spea_3843 |
Symbol | pyrE |
ID | 5664227 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella pealeana ATCC 700345 |
Kingdom | Bacteria |
Replicon accession | NC_009901 |
Strand | - |
Start bp | 4670794 |
End bp | 4671435 |
Gene Length | 642 bp |
Protein Length | 213 aa |
Translation table | 11 |
GC content | 48% |
IMG OID | 641238507 |
Product | orotate phosphoribosyltransferase |
Protein accession | YP_001503688 |
Protein GI | 157963654 |
COG category | [F] Nucleotide transport and metabolism |
COG ID | [COG0461] Orotate phosphoribosyltransferase |
TIGRFAM ID | [TIGR00336] orotate phosphoribosyltransferase |
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Plasmid Coverage information |
Num covering plasmid clones | 35 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGAAAGCCT ATCAACGTGA GTTTATTGAA TTTGCCCTAG AACGTCAGGT ACTTCGATTT GGCGAATTTA CGTTAAAGTC AGGCCGCACT AGCCCTTATT TCTTTAACGC TGGCCTGTTT AACACTGGCC GTGACTTAGC GCGTCTAGGT CGTTTCTACG CAGCGGCACT AGTTGACTCT GGTATTGAGT ATGACTTGCT ATTTGGCCCT GCATACAAAG GTATTCCAAT CGCGACCACG ACTGCTGTAG CACTGTGTGA TCACCACGAT ATCGACATGC CTTACTGCTT TAACCGTAAA GAGAAGAAAG ATCACGGCGA AGGTGGCAGC CTAGTAGGTA GCGAACTTCA AGGGCGCGTA ATGCTAGTTG ATGACGTGAT CACTGCTGGT ACGGCGATTC GTGAGTCTAT GGAGATCATT GCTGCGCACA AGGCATCACT TGCGGGTGTG TTGATTGCGT TAGACCGTCA AGAGAAGGGC AAGGGCGAGC TTTCTGCTAT TCAAGAAGTT GAGCGTGATT TTGGTTGTGA CATCGTTTCA ATCATCAAGC TTGAAGACTT GATCAATTAC TTGTCTGAAA AATCAGGCAT GGAAGCGCAG CTTGCTTCAG TAAGCGCTTA CCGCGACCAG TATGGGATTT AA
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Protein sequence | MKAYQREFIE FALERQVLRF GEFTLKSGRT SPYFFNAGLF NTGRDLARLG RFYAAALVDS GIEYDLLFGP AYKGIPIATT TAVALCDHHD IDMPYCFNRK EKKDHGEGGS LVGSELQGRV MLVDDVITAG TAIRESMEII AAHKASLAGV LIALDRQEKG KGELSAIQEV ERDFGCDIVS IIKLEDLINY LSEKSGMEAQ LASVSAYRDQ YGI
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