Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Spea_3840 |
Symbol | slmA |
ID | 5664224 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella pealeana ATCC 700345 |
Kingdom | Bacteria |
Replicon accession | NC_009901 |
Strand | + |
Start bp | 4666647 |
End bp | 4667240 |
Gene Length | 594 bp |
Protein Length | 197 aa |
Translation table | 11 |
GC content | 47% |
IMG OID | 641238504 |
Product | nucleoid occlusion protein |
Protein accession | YP_001503685 |
Protein GI | 157963651 |
COG category | [K] Transcription |
COG ID | [COG1309] Transcriptional regulator |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.00664895 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGCTGCAA GCCCGAAAAT AAACCGTCGT GAGCATATCC TCCAATGTTT AGCGACTATG TTAGAAACAA GCCCTGGACA AAGGATCACT ACAGCTAAAT TAGCGGCTGA AGTCGGCGTT TCAGAAGCGG CGCTTTACCG CCACTTTCCA AGTAAGGCGC GCATGTTTGA AGGCCTCATC GAATTTATCG AAGAGTCATT GCTCTCTCGC ATCAACCTGA TCATGGACGA AGAGAAAGAC ACCATGAAGC GTTGTCAGCA ATTGCTGCAG CTACTACTGG TATTTGCCGA GCGAAACCCG GGGATCTCAC GAGTATTAAA TGGTGATGCA CTGCTAGGCG AAAATGAACG TCTACGTAGC CGTATCAGTC AGCTATTCTC AAAAATTGAA ACCCACTTAA AGCAAATCCT GCGTGAAAAA AGCTTACGTG AAGGCAAAGG CTTTGAGCTC GATGAAGCAG TGTTAGCTAA CTTACTGCTT GCCGTTGCCG AAGGCCGAAT CGCTCAGTTT GTTCGTAGTG AGTTTAAACT CAAGCCGACC AAGCACTTCA ATGAGCAGTG GAACTTCATC CAACAGCAAC TGCTTCAAAG CTAA
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Protein sequence | MAASPKINRR EHILQCLATM LETSPGQRIT TAKLAAEVGV SEAALYRHFP SKARMFEGLI EFIEESLLSR INLIMDEEKD TMKRCQQLLQ LLLVFAERNP GISRVLNGDA LLGENERLRS RISQLFSKIE THLKQILREK SLREGKGFEL DEAVLANLLL AVAEGRIAQF VRSEFKLKPT KHFNEQWNFI QQQLLQS
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