| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Spea_3838 |
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| Symbol | |
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| ID | 5664222 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella pealeana ATCC 700345 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009901 |
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| Strand | + |
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| Start bp | 4664896 |
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| End bp | 4666089 |
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| Gene Length | 1194 bp |
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| Protein Length | 397 aa |
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| Translation table | 11 |
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| GC content | 52% |
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| IMG OID | 641238502 |
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| Product | phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase |
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| Protein accession | YP_001503683 |
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| Protein GI | 157963649 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG0452] Phosphopantothenoylcysteine synthetase/decarboxylase |
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| TIGRFAM ID | [TIGR00521] phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase, prokaryotic |
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Plasmid Coverage information |
| Num covering plasmid clones | 2 |
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| Plasmid unclonability p-value | 0.00000200713 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGGTCTCA ACAACAAAAA AGTATTACTG GGTATTGGTG GTGGCATTGC CGCATACAAA
TCGGCCGACC TAGTACGCAA GTTAAAGGAA CGCGGCGCCG ATGTCCGTGT TGTTATGAGT
CAAAGTGCAC AAGAGTTTAT TACTCCGCTA ACTTTGCAGG CGCTTTCCGG TTATCCAGTG
GCGACCGATC TGCTTGATCC TACGGCCGAA GCCTCTATGG GGCACATCGA GCTCGCACGT
TGGGCAGACC TAGTCATCAT AGCTCCAGCC ACCGCCAACC TTATCGCTCG GGTAAATGCC
GGCATGGCAG ATGAGTTAAT TACCACCACC TGCCTAGCCA CCGAAGCCCC TGTAGTGATT
TGCCCCGCAA TGAACCAACA GATGTATCGC AACGCCGCAA CCCAAGCTAA CTTGAAGCAA
GTAGCCGAGC GCGGTATCTA CATTTGGGGG CCAGATTCAG GCTCGCAAGC CTGTGGCGAA
GTCGGCCCAG GTAGAATGCT TGAGCCTGTG GCGATTGCTG AAAAAGCAGT TGAATTTTTT
GGCCCAAAAC TGCTGCAAGG CATGTCATTG CTGCTTACAG CAGGTCCGAC TCGTGAGGCT
ATCGATCCGG TTCGTTATAT TTCCAACCAT AGCTCAGGCA AGATGGGCTT TGCCCTTGCC
AAAGCCGCAG CAGCAATGGG CGCAGAGGTG ACCTTAGTTG CCGGCCCGGT CAATCTAGCG
ACGCCCGCAG GCGTCACCCG AGTCAATGTT GAGTCGGCTC AGCAGATGCT AGATGCGGTA
ATGCCACAAG TTGAGATGCA CCAAATATTT ATCGGCTGCG CCGCCGTGGC CGATTACCGC
ATCGCAGAAG TCGCCGAGAG TAAAATCAAG AAATCGGCAG AGCAGATGCA ACTTGCGCTA
GTGCGAAATC CTGATATCTT AGCCAGCGTT GCCAGCCATG CTAACCGACC TTTCACCGTT
GGATTTGCCG CTGAAACCAA CGATGTAGAG CAATATGCCC GTGGAAAGTT AACAGGTAAA
AAGCTCGACA TGATTGCCGC TAATGACGTA TCAAATAGCG CCATTGGCTT TAACAGTGAC
TCCAACGCCC TAAGCGTATT TTGGAGTGAT GGTAGCACCG ACCTACCCGC TGTTGATAAA
GACACTTTAG CCAAGCAATT GCTTACTCTA ATAGCGAACA AAATAAAAAA CTGA
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| Protein sequence | MGLNNKKVLL GIGGGIAAYK SADLVRKLKE RGADVRVVMS QSAQEFITPL TLQALSGYPV
ATDLLDPTAE ASMGHIELAR WADLVIIAPA TANLIARVNA GMADELITTT CLATEAPVVI
CPAMNQQMYR NAATQANLKQ VAERGIYIWG PDSGSQACGE VGPGRMLEPV AIAEKAVEFF
GPKLLQGMSL LLTAGPTREA IDPVRYISNH SSGKMGFALA KAAAAMGAEV TLVAGPVNLA
TPAGVTRVNV ESAQQMLDAV MPQVEMHQIF IGCAAVADYR IAEVAESKIK KSAEQMQLAL
VRNPDILASV ASHANRPFTV GFAAETNDVE QYARGKLTGK KLDMIAANDV SNSAIGFNSD
SNALSVFWSD GSTDLPAVDK DTLAKQLLTL IANKIKN
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