| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Spea_3828 |
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| Symbol | |
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| ID | 5664212 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella pealeana ATCC 700345 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009901 |
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| Strand | - |
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| Start bp | 4653521 |
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| End bp | 4655092 |
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| Gene Length | 1572 bp |
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| Protein Length | 523 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 641238492 |
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| Product | 2-isopropylmalate synthase |
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| Protein accession | YP_001503673 |
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| Protein GI | 157963639 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0119] Isopropylmalate/homocitrate/citramalate synthases |
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| TIGRFAM ID | [TIGR00973] 2-isopropylmalate synthase, bacterial type |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.507391 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTCTAACC GAGTGATTAT ATTTGACACC ACCCTACGCG ATGGTGAACA AGCATTAGCA
GCAAGTTTAA CGGTTAAGGA AAAACTTCAA ATTGCACTCG CGTTAGAGCG TTTAGGTGTC
GATGTGATGG AAGTTGGCTT TCCCGTTTCT TCTCCTGGTG ACTTCGAGTC GGTACAAACC
ATTGCTAAAA CTATTAAAAA TAGCCGAGTT TGTGCCCTAT CACGTGCATT AGAAAAGGAT
ATCGATGCCG CTGCACAGGC CTTGTCAGTG GCCGAGCAGT TCCGTATTCA TACCTTTATT
TCAACTTCGA CCATTCACGT CGAGAGTAAA TTAAAGCGCT CATTTGATCA GGTGCTGGAA
ATGGCGGTTG GCGCTGTTAA GTATGCCCGC CGTTTCACCG ATGATGTGGA GTTTTCTTGT
GAAGACGCAG GCCGTACACC TATCGATAAC TTATGTCGCA TGGTGGAGGA GGCGATTAAA
GCTGGCGCGC GTACCATTAA TATTCCCGAC ACTGTGGGTT ATACGGTACC GAGTGAGTTT
GGCGGCATCA TTCAGACTCT GTTTAATCGG GTACCCAATA TCGACCAAGC GGTGATCTCG
GTGCATTGTC ATGACGATTT AGGTTTGTCG GTTGCTAACT CTATTACTGC CGTGCAGCAC
GGAGCTCGCC AAATAGAGTG TACCGTCAAC GGTATTGGTG AGCGTGCGGG TAATTGTTCT
CTAGAAGAGA TCGCCATGAT CTTATCGACT CGCAAGGGTG AGCTAGGACT TGAGACGGGT
ATTAATGCCA AAGAGATCCA CCGTACCTCA AGCTTGGTTA GTCAACTTTG TAATATGCCT
GTGCAGGCGA ATAAGGCCAT TGTTGGCGCG AATGCATTCA CTCACTCATC GGGCATTCAT
CAAGATGGCA TGCTAAAAGC GCAAAACACC TATGAGATTA TGACGCCTGA GAGCATTGGC
TTAAATCGCA ATAACTTGAA TATGACCTCA CGCTCTGGCC GTCATGTGAT TAAGCACCGT
ATGAGTGAGC TGGGCTATGG TGAGCAAGAT TATAATATGG ATGTCTTGTA TGAGGAGTTT
TTGACCCTAG CAGATAAGAA GGGTCAGGTG TTTGATTATG ACCTAGAGGC GCTTGCCTTT
ATGGAAGCTC AAGCCGAAAC CGATGATCAC TATAAATTAC AGCAGCTAGT AGTACATTCA
GACTCTACAG AAGGCAGCGC AACAGCTACG GTCAAGGTTG CGGTTAACGG TGAAACCATT
ACCGAAGCCG CGACGGGTAA TGGTCCTGTC GATGCCGCTT ATAAGGCCGT TGCTCGGGCC
AGTGGTTGTG AAATCAACAT TAGCAGTTAC CAGTTAAGCG CAAAAGGCGA GGGGCAAAAT
GCCTTGGGCC AAGTGGATAT TACCGCTAAG TATCGCGAGC AAAACTTCCA TGGTGTTGGC
TTAGCTACCG ACGTGGTTGA GGCGTCAGCC AAGGCTTTGG TCCATGTGAT GAACCTAACT
TGGCGCGCCG ATAAAGTCGC CGATTGTAAG CAGCGTATTC AGCAGAACAA GCGAGAGCTC
GGTGGCGTGT AA
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| Protein sequence | MSNRVIIFDT TLRDGEQALA ASLTVKEKLQ IALALERLGV DVMEVGFPVS SPGDFESVQT
IAKTIKNSRV CALSRALEKD IDAAAQALSV AEQFRIHTFI STSTIHVESK LKRSFDQVLE
MAVGAVKYAR RFTDDVEFSC EDAGRTPIDN LCRMVEEAIK AGARTINIPD TVGYTVPSEF
GGIIQTLFNR VPNIDQAVIS VHCHDDLGLS VANSITAVQH GARQIECTVN GIGERAGNCS
LEEIAMILST RKGELGLETG INAKEIHRTS SLVSQLCNMP VQANKAIVGA NAFTHSSGIH
QDGMLKAQNT YEIMTPESIG LNRNNLNMTS RSGRHVIKHR MSELGYGEQD YNMDVLYEEF
LTLADKKGQV FDYDLEALAF MEAQAETDDH YKLQQLVVHS DSTEGSATAT VKVAVNGETI
TEAATGNGPV DAAYKAVARA SGCEINISSY QLSAKGEGQN ALGQVDITAK YREQNFHGVG
LATDVVEASA KALVHVMNLT WRADKVADCK QRIQQNKREL GGV
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