Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Spea_3815 |
Symbol | |
ID | 5664199 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella pealeana ATCC 700345 |
Kingdom | Bacteria |
Replicon accession | NC_009901 |
Strand | - |
Start bp | 4638663 |
End bp | 4640042 |
Gene Length | 1380 bp |
Protein Length | 459 aa |
Translation table | 11 |
GC content | 48% |
IMG OID | 641238479 |
Product | UDP-N-acetylmuramoylalanyl-D-glutamyl-2, 6-diaminopimelate--D-alanyl-D-alanyl ligase |
Protein accession | YP_001503660 |
Protein GI | 157963626 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0770] UDP-N-acetylmuramyl pentapeptide synthase |
TIGRFAM ID | [TIGR01143] UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase |
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Plasmid Coverage information |
Num covering plasmid clones | 32 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGATTAGGG TTTCTTTAGC CGAGTTAGCG ACGCGCCTGA ATGGCCAGTT GATTGGAGAT GATCTGCCAA TCGATAGCGT CTCTAGCGAC AGTCGAGCAG TAGATAGCAA GACGCTTTTT GTCGCATTGA AAGGTGATAA TTTTGATGGT CATAACTTCG CTCAGGCAGC GGTCGATGCT GGTGCGAACG CATTGTTGGT AGAAAGAGAG TTACCGATAG ACGCCGCACA AATTGTCGTG GCAAATAGCC AGCGTGCGAT GGGCGAAATT GGCGCCTATG TGCGTGAACA GCTTGCGCCA ACTTGTGTTG CCTTAACCGG TTCAAATGGT AAGACTAGCG TAAAAGAGAT GATAGCGACT ATCTTGTCGC AACAGCATCG AGTGCTCTAT ACCGCGGGTA ACTTCAATAA CGAAATTGGT GTGCCGTTAA CCTTGCTGAG ATTGAAGCAA GGTGATGAGT TTGGCGTATT TGAGCTTGGC GCTAACCACG CAGGTGAGAT TGACTATACC TCTGGTTTGG TCAAACCGAG TGTGGCCATG GTGAATAACG TCGCTTCGGC TCACCTTGAA GGGTTCGGCT CTTTAGAGGG GGTGGCTAAG GCTAAGTCTG AGATCTTTAA TCACGTTACC GTAGGCGGTA CAGCAGTGAT TAATGCCGAT GATGCATTTG CTGATGTCAT GCTTCAGGCG TCTAGCCACG TTAAGCAGTT ATGTTTTGGT GTTAAAAATG AAGCGTCGAG AGATCTCGAT GTTTTTGCTA CAGATTTGAT TGCAGATTCT TACGGACGTT ATGCCTTTAG CCTTTGCTAC GGTGCAGAAG TTCATAGAGT TGAGTTGCCG TTGGCTGGGC GTCACCAGGT GTCTAATGCG CTAGCGGCGA CCAGTATCTG TTTAGCATTA GGTTTGTCTT TGGCTCATAT TTGCCAAGGA CTTAGCCAAC TAAAACCTGT GAAGGGCCGC ATGCTGCCAA GTGTACTTGG GCGGGTGACG GTAATCGATG ATAGCTATAA CGCAAATCCG GCTTCAGTGG GCGCAGCTAT CGACTGGCTT CAAGAAATTA AAGGAAATCG CTGTTTAGTA CTGGGCGATT TGGGCGAATT AGGCGACAAT GCCGCCCTTT TGCATCGCGA GCTTGGGGCG TTAGCCAAGG CAAAAGGCGT AAATTCGCTG TTTTGTGTCG GTACGCTAAG CGAGGGTGCG AGTCATGCTT TTGGTTCCAA ACACTATCAA GATATTGATG ATTTGGTTGC AGGATTAATT CAATACATTA ATGAATTACC TGCCGAAATT ACCGTGTTAG TGAAAGGTTC TCGCAGTGCG AGAATGGAAC GTGTAGTAGA AGCTTTAACA ACGGCCTTTG GTCGCGGGGA GTTTGTTTAA
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Protein sequence | MIRVSLAELA TRLNGQLIGD DLPIDSVSSD SRAVDSKTLF VALKGDNFDG HNFAQAAVDA GANALLVERE LPIDAAQIVV ANSQRAMGEI GAYVREQLAP TCVALTGSNG KTSVKEMIAT ILSQQHRVLY TAGNFNNEIG VPLTLLRLKQ GDEFGVFELG ANHAGEIDYT SGLVKPSVAM VNNVASAHLE GFGSLEGVAK AKSEIFNHVT VGGTAVINAD DAFADVMLQA SSHVKQLCFG VKNEASRDLD VFATDLIADS YGRYAFSLCY GAEVHRVELP LAGRHQVSNA LAATSICLAL GLSLAHICQG LSQLKPVKGR MLPSVLGRVT VIDDSYNANP ASVGAAIDWL QEIKGNRCLV LGDLGELGDN AALLHRELGA LAKAKGVNSL FCVGTLSEGA SHAFGSKHYQ DIDDLVAGLI QYINELPAEI TVLVKGSRSA RMERVVEALT TAFGRGEFV
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