| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Spea_3803 |
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| Symbol | |
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| ID | 5664835 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella pealeana ATCC 700345 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009901 |
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| Strand | - |
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| Start bp | 4623827 |
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| End bp | 4626550 |
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| Gene Length | 2724 bp |
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| Protein Length | 907 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 641238467 |
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| Product | preprotein translocase subunit SecA |
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| Protein accession | YP_001503648 |
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| Protein GI | 157963614 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG0653] Preprotein translocase subunit SecA (ATPase, RNA helicase) |
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| TIGRFAM ID | [TIGR00963] preprotein translocase, SecA subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 1 |
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| Plasmid unclonability p-value | 0.0000517033 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTTTGGTA AATTACTGAC AAAAGTATTT GGTAGTCGCA ACGATCGTAC ACTTAAGGCA
TTTGGTAAAG TCGTTAATAA GGTTAACGCG CTAGAAGCTG AATACGAAAA GCTATCGGAT
GAAGAATTAA AAGCAAAAAC AGCCCACTTC CGCGAGCGTT TAGACGGTGG TGAATCATTA
GAAGGCGTTT TACCAGAAGC ATTTGCTACT GTACGTGAAG CATCGAAGCG TGTATTTGAT
ATGCGCCACT TCGATGTACA GCTTATTGGC GGCATGATTT TGGATAGTAA CCGTATCGCA
GAAATGCGTA CCGGTGAAGG TAAAACCCTA ACGGCAACTC TGCCTGCTTA TTTAAATGGT
TTAACAGGTA AAGGTGTTCA CGTTATTACA GTGAACGACT ACCTAGCTGG CCGTGATGCT
GAAAATAACC GTCCTCTTTT TGAATTCCTT GGCTTAACTG TTGGTATTAA CGTTGCGGGT
CTTGGCCAGG TAGAAAAGAA AGCGGCTTAT GATGCTGATA TTACCTACGG AACTAACAAT
GAATTTGGTT TCGATTACCT GCGTGACAAC ATGGCGTTCT CTCCAAGCGA ACGCGTACAA
CGGCCATTGC ATTACGCGCT AATCGACGAA GTCGACTCGA TTCTTATTGA TGAAGCACGT
ACTCCGTTAA TTATTTCTGG TGCTGCTGAA GATAGCTCTG AGCTATACAT CAAGATTAAC
ACGCTAATCC CTAACCTTAT CGCGCAAGAG AAAGAAGATA CTGAAGATTA TGTGGGCGAA
GGCGACTACT CTGTAGATGA GAAGTCAAAG CAAGTTCATA TGACTGAGCG TGGGCAAGAG
AAGGTTGAGG TCTTATTGAC TGAGCGCGGC ATGCTTGCCG AAGGTGATTC ACTCTACTCA
GCGGCTAACA TCTCTTTATT ACACCATGTG AATGCAGCAC TACGCGCGCA CACATTATTC
GAGAAAGACG TCGACTATAT TGTTCAAGAT AACGAAGTAG TTATCGTTGA TGAGCATACA
GGCCGTACTA TGCCTGGTCG TCGCTGGTCT GAAGGTCTAC ATCAAGCGGT TGAAGCGAAA
GAAGGCGTTC ATATTCAAAA TGAAAACCAG ACTCTTGCAT CGATTACATT CCAGAACTTC
TTCCGTCAAT ATGAAAAGCT TGCAGGTATG ACGGGTACTG CCGATACCGA AGCGTTCGAA
TTCCAGCATA TTTATGGTCT TGATACTGTA GTAGTACCAA CAAACCGTCC AATGGTTCGT
AAAGATCATC CGGATCTGGT TTACTTAACT GCTGAAGAGA AGTATGCCGC GATCGTTAAA
GATATCGTTG GCTGTCGTGA GCGTGGTCAG CCAGTATTGG TTGGTACGGT TTCGATTGAG
CAGTCAGAAC TGCTGCACAG CTTACTGAAG AAAGAAAAGA TCCCACATGA GATCTTGAAT
GCTAAGTTCC ACGAACGTGA AGCAGATATC GTTGCTCAAG CGGGTCGTAC TGGAGCGGTA
ACCGTTGCAA CTAACATGGC GGGTCGTGGT ACCGATATCG TGTTAGGTGG TAACTGGAAC
ATGGAGATCG AAGCGCTAAC CAATCCAACT GACGAGCAGA AAGCCAAGAT TAAGGCTGAC
TGGAAAATTC GTCACGACGA AGTTGTTGAA GCCGGTGGTC TACACATCTT AGGTACAGAG
CGTCACGAAT CTCGCCGTAT CGATAACCAG TTACGTGGTC GTTCTGGTCG TCAAGGTGAC
TCTGGTTCTT CTCGTTTTTA CCTATCTATG GAAGATAGCT TAATGCGTAT CTTCGCTTCA
GACCGTGTCT CTTCAATGAT GAAGAAGCTA GGTATGGAAG AAGGTGAAGC GATTGAGCAT
CCATGGGTGT CACGTGCTAT CGAAAACGCG CAGCGTAAAG TAGAAGCTCG TAACTTCGAT
ATTCGTAAGC AGTTACTTGA GTTTGATGAT GTTGCTAACG ATCAGCGCCA AGTCGTTTAC
GCGCAGCGTA ATGAATTAAT GGATGCCGAA AGTATTCAAG ATACTATCAC CAATATTCAA
GAAGACGTGG TTAATGGTTT AGTTGATCAA TACATTCCGC GTCAATCAGT AGAAGAGCTT
TGGGATGTCG AAGGCCTAGA GAAACGTCTG CAACAAGAAT ATGCAATGAG TCTACCTATC
CAAGAGTGGC TAGATAAAGA AGATGACTTG CACGAAGAAA CATTACGTGA GCGTATTGTT
GAAACTTGGG TTAATGCATA CAAAGCTAAA GAAGAGATGG TAGGCGAGCA AGTGCTACGT
CAATTCGAAA AAGCGGTAAT GCTACAAACG CTAGACGGTT TATGGAAAGA GCACCTTTCA
GCGATGGACC ACTTGCGCCA AGGTATCCAC TTACGTGGCT ATGCACAGAA GAATCCAAAG
CAAGAATATA AGCGTGAATC ATTCGAGCTA TTCCAGCAGA TGCTTGAGTC ATTAAAGCAT
GACGTCATTA GTGTATTGTC TAAAGTACAA GTACAGGCAC AGTCAGATGT TGAAGAGATG
GAAGAGCGCC GTCGTCAAGA AGACGCAAAA ATCCGTCGTG ACTATCAACA CGCAGAAGCT
GAAGCCATCG TTGGCGCTGA AGAAAGTGCA GCGCTTGCGG CTACTCAGCC AACGGTACGT
GATGGCGAAA AAGTGGGACG TAACGATCCA TGCCCATGTG GTTCAGGCAA GAAGTATAAA
CAGTGTCACG GTAAGCTAAG CTAA
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| Protein sequence | MFGKLLTKVF GSRNDRTLKA FGKVVNKVNA LEAEYEKLSD EELKAKTAHF RERLDGGESL
EGVLPEAFAT VREASKRVFD MRHFDVQLIG GMILDSNRIA EMRTGEGKTL TATLPAYLNG
LTGKGVHVIT VNDYLAGRDA ENNRPLFEFL GLTVGINVAG LGQVEKKAAY DADITYGTNN
EFGFDYLRDN MAFSPSERVQ RPLHYALIDE VDSILIDEAR TPLIISGAAE DSSELYIKIN
TLIPNLIAQE KEDTEDYVGE GDYSVDEKSK QVHMTERGQE KVEVLLTERG MLAEGDSLYS
AANISLLHHV NAALRAHTLF EKDVDYIVQD NEVVIVDEHT GRTMPGRRWS EGLHQAVEAK
EGVHIQNENQ TLASITFQNF FRQYEKLAGM TGTADTEAFE FQHIYGLDTV VVPTNRPMVR
KDHPDLVYLT AEEKYAAIVK DIVGCRERGQ PVLVGTVSIE QSELLHSLLK KEKIPHEILN
AKFHEREADI VAQAGRTGAV TVATNMAGRG TDIVLGGNWN MEIEALTNPT DEQKAKIKAD
WKIRHDEVVE AGGLHILGTE RHESRRIDNQ LRGRSGRQGD SGSSRFYLSM EDSLMRIFAS
DRVSSMMKKL GMEEGEAIEH PWVSRAIENA QRKVEARNFD IRKQLLEFDD VANDQRQVVY
AQRNELMDAE SIQDTITNIQ EDVVNGLVDQ YIPRQSVEEL WDVEGLEKRL QQEYAMSLPI
QEWLDKEDDL HEETLRERIV ETWVNAYKAK EEMVGEQVLR QFEKAVMLQT LDGLWKEHLS
AMDHLRQGIH LRGYAQKNPK QEYKRESFEL FQQMLESLKH DVISVLSKVQ VQAQSDVEEM
EERRRQEDAK IRRDYQHAEA EAIVGAEESA ALAATQPTVR DGEKVGRNDP CPCGSGKKYK
QCHGKLS
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