Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Spea_3797 |
Symbol | |
ID | 5664182 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella pealeana ATCC 700345 |
Kingdom | Bacteria |
Replicon accession | NC_009901 |
Strand | + |
Start bp | 4610933 |
End bp | 4611694 |
Gene Length | 762 bp |
Protein Length | 253 aa |
Translation table | 11 |
GC content | 44% |
IMG OID | 641238457 |
Product | Sec-independent protein translocase, TatC subunit |
Protein accession | YP_001503643 |
Protein GI | 157963609 |
COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG0805] Sec-independent protein secretion pathway component TatC |
TIGRFAM ID | [TIGR00945] Twin arginine targeting (Tat) protein translocase TatC |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTCACAAC AGCAGCCATT AATCAGCCAT CTGCTCGAGT TGCGCACTAA GTTACTGCGG GCAATTGGCA GTGTTCTTTT GGTGTTTATT TGCTTGGTAT ATTGGGCAAA CGATATCTAC CATTATATGG CCACCCCATT GATGCAGGCA CTGCCTGAAT CAAGCAGTAT GATTGCAACC GATGTTGCTG CGCCATTTTT TGCCCCCTTT AAATTGACAT TAGTTCTGTC GTTTTTTGTT GCAGTACCTT ATGTCCTTTA TCAAGTGTGG TCTTTTGTCG CACCTGGTCT GTATAAGCAT GAAAAGCGCT TGGTTGTACC TCTACTAGCG AGCAGTACGT TGCTCTTCTA TCTAGGTATC GCTTTCGCCT ATTATATCGT TTTCCCTGTC GTATTTGGTT TCTTTACCAG CGTGGCCCCT GAAGGGGTTG AAGTTGCGAC TGACATCAGC AGTTATTTGA ATTTTATTCT AAAACTGTTC TTTGCATTTG GTTTGGCTTT TGAGATCCCA GTAGCGGTTG TCCTACTATG TTGGGCGGGT GTCACCACAC CTGCAGAGCT AAAAGAGAAA CGACCATATA TCGTGGTCGG TGCATTTGTT ATCGGTATGC TACTAACGCC ACCAGATATC ATCTCTCAAA CTATGTTAGC GATCCCAATG CTAATTCTGT TTGAAGGCGG TTTAGTGGCT GCACGTTTCT ACAGCAAGCC AGATGAAGAT GAAGATGAAG ATGAGACTGA GCAGGAAAAA CCTGAGTCTT AG
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Protein sequence | MSQQQPLISH LLELRTKLLR AIGSVLLVFI CLVYWANDIY HYMATPLMQA LPESSSMIAT DVAAPFFAPF KLTLVLSFFV AVPYVLYQVW SFVAPGLYKH EKRLVVPLLA SSTLLFYLGI AFAYYIVFPV VFGFFTSVAP EGVEVATDIS SYLNFILKLF FAFGLAFEIP VAVVLLCWAG VTTPAELKEK RPYIVVGAFV IGMLLTPPDI ISQTMLAIPM LILFEGGLVA ARFYSKPDED EDEDETEQEK PES
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