Gene Spea_3777 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSpea_3777 
Symbol 
ID5664162 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella pealeana ATCC 700345 
KingdomBacteria 
Replicon accessionNC_009901 
Strand- 
Start bp4591447 
End bp4592175 
Gene Length729 bp 
Protein Length242 aa 
Translation table11 
GC content46% 
IMG OID641238437 
Producthypothetical protein 
Protein accessionYP_001503623 
Protein GI157963589 
COG category 
COG ID 
TIGRFAM ID[TIGR03505] FimV N-terminal domain 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAGAGAG TCATATGGGC GTTAGCTAGC ATGATGCTGC TGTCAACAGC CCACGCACAG 
GTGTCGCACG TTAGCATTAA TGAGCGTCAG TTTGAGTTCG GCGAGCATCC CAGTCTAAAA 
CTCAATATTG TGTCATCTCA CAGTAACTTG AAAAAGGTCC AGTTTTCTAT TCGTCAGGCG 
AGCGGTGAAG AGCGGCTGAT CTCTAAGCCT TTGACTAGCT TTATGGTTGA GGTGACGGGT 
ATTGATGATG TCGTTGATAA AGATGCGCTG TTGATTGTGA AGGAGTATCG AGTAAACCGC 
TGGCATCAAG TTAAAGTATT GAGTCTATTT AATGCGAATA CGCCGGAACT CGAAATAGAC 
AGTCACCATA GCGCGAGTCA TTCGTTACCT AGCGAAAATA GAACCCAGTC AGAAGCAAAG 
TCGGTGGCGC TAAATAGTGG AATTAGGGTC AGTGGTGCAG ACGTTATTGT TAGCCGTTTA 
GATGACTGCC AAGTTGATTT CGACGGCAAA GAGAGCCTAT GGCGTATCGC AAATCGACAG 
TCTCAGCGAT GGGGGATTAG CCCTTATGGA GCTATGTTGG CTCTGTTTGA GGCGAACCCT 
AAGGCATTTA ATCAGCATAG CATTCATGGC TTAAAAGCAA ATGGGAAACT GGAGTGCCCA 
TCGATGAGCA CGTTGGAAAA GTATGCCGAT GCTAAGGCAG CTGAGAAGCA GTTCGATGCA 
ATAAAATAG
 
Protein sequence
MKRVIWALAS MMLLSTAHAQ VSHVSINERQ FEFGEHPSLK LNIVSSHSNL KKVQFSIRQA 
SGEERLISKP LTSFMVEVTG IDDVVDKDAL LIVKEYRVNR WHQVKVLSLF NANTPELEID 
SHHSASHSLP SENRTQSEAK SVALNSGIRV SGADVIVSRL DDCQVDFDGK ESLWRIANRQ 
SQRWGISPYG AMLALFEANP KAFNQHSIHG LKANGKLECP SMSTLEKYAD AKAAEKQFDA 
IK