Gene Spea_3752 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSpea_3752 
Symbol 
ID5664137 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella pealeana ATCC 700345 
KingdomBacteria 
Replicon accessionNC_009901 
Strand- 
Start bp4564847 
End bp4565335 
Gene Length489 bp 
Protein Length162 aa 
Translation table11 
GC content46% 
IMG OID641238412 
Productrod shape-determining protein MreD 
Protein accessionYP_001503598 
Protein GI157963564 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG2891] Cell shape-determining protein 
TIGRFAM ID[TIGR03426] rod shape-determining protein MreD 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.0156761 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGTTTAC ATGTAGCAAA TGGCCGCTGG GTCGTTTGGT TAAGCCTATT AGTGGCTATG 
CTGTTTCAAA TTATGCCATT GCCAGATGTG GTAGAGGCGT GGCGTCCGGA TTGGCTATTA 
CTGGTTATCA CCTATTGGGC GATGGCATTG CCTCATAGAT ATAATATTTT AACGGCATGG 
GTGCTCGGTG TGATGCTAGA CATCTTACTC GGGGCAACCT TAGGTATTCG TGCCTTTGCT 
ATGTCAGTTG TTGTATATGT GGTCGTGCTG CACTTTCAGC GCTTACGTAA TTTCCCTATG 
TGGCAACAAG CTTTATTGGT GGCCATGCAG GTCGCAGTAT ATAACCTAGT GGTATTTTGG 
GTGCAGTTTG TTACCGAGTC TGCTGTGTTT GATATTAGCT TGTTCTACCC GGCAATTTCC 
AGCTTGATTA TGTGGCCATG GATCTTCTGG GTATTACGCC GTGTAAGACG CCTGTACAAG 
GTTAGATAG
 
Protein sequence
MSLHVANGRW VVWLSLLVAM LFQIMPLPDV VEAWRPDWLL LVITYWAMAL PHRYNILTAW 
VLGVMLDILL GATLGIRAFA MSVVVYVVVL HFQRLRNFPM WQQALLVAMQ VAVYNLVVFW 
VQFVTESAVF DISLFYPAIS SLIMWPWIFW VLRRVRRLYK VR